Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1517 | 4774;4775;4776 | chr2:178777516;178777515;178777514 | chr2:179642243;179642242;179642241 |
N2AB | 1517 | 4774;4775;4776 | chr2:178777516;178777515;178777514 | chr2:179642243;179642242;179642241 |
N2A | 1517 | 4774;4775;4776 | chr2:178777516;178777515;178777514 | chr2:179642243;179642242;179642241 |
N2B | 1471 | 4636;4637;4638 | chr2:178777516;178777515;178777514 | chr2:179642243;179642242;179642241 |
Novex-1 | 1471 | 4636;4637;4638 | chr2:178777516;178777515;178777514 | chr2:179642243;179642242;179642241 |
Novex-2 | 1471 | 4636;4637;4638 | chr2:178777516;178777515;178777514 | chr2:179642243;179642242;179642241 |
Novex-3 | 1517 | 4774;4775;4776 | chr2:178777516;178777515;178777514 | chr2:179642243;179642242;179642241 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs1438474327 | -1.373 | 0.997 | D | 0.697 | 0.62 | 0.701978191309 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
I/M | rs1438474327 | -1.373 | 0.997 | D | 0.697 | 0.62 | 0.701978191309 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/M | rs1438474327 | -1.373 | 0.997 | D | 0.697 | 0.62 | 0.701978191309 | gnomAD-4.0.0 | 2.02973E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.40978E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.937 | likely_pathogenic | 0.9456 | pathogenic | -3.046 | Highly Destabilizing | 0.983 | D | 0.703 | prob.neutral | None | None | None | None | N |
I/C | 0.9784 | likely_pathogenic | 0.9804 | pathogenic | -2.467 | Highly Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
I/D | 0.9994 | likely_pathogenic | 0.9994 | pathogenic | -3.788 | Highly Destabilizing | 0.999 | D | 0.863 | deleterious | None | None | None | None | N |
I/E | 0.9979 | likely_pathogenic | 0.9981 | pathogenic | -3.536 | Highly Destabilizing | 0.999 | D | 0.871 | deleterious | None | None | None | None | N |
I/F | 0.7303 | likely_pathogenic | 0.7515 | pathogenic | -1.803 | Destabilizing | 0.997 | D | 0.733 | prob.delet. | D | 0.584529973 | None | None | N |
I/G | 0.9971 | likely_pathogenic | 0.9975 | pathogenic | -3.616 | Highly Destabilizing | 0.999 | D | 0.874 | deleterious | None | None | None | None | N |
I/H | 0.9954 | likely_pathogenic | 0.9957 | pathogenic | -3.082 | Highly Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
I/K | 0.9937 | likely_pathogenic | 0.994 | pathogenic | -2.578 | Highly Destabilizing | 0.999 | D | 0.869 | deleterious | None | None | None | None | N |
I/L | 0.3805 | ambiguous | 0.3905 | ambiguous | -1.365 | Destabilizing | 0.798 | D | 0.437 | neutral | D | 0.538458889 | None | None | N |
I/M | 0.3972 | ambiguous | 0.4336 | ambiguous | -1.382 | Destabilizing | 0.997 | D | 0.697 | prob.neutral | D | 0.676736983 | None | None | N |
I/N | 0.9893 | likely_pathogenic | 0.9913 | pathogenic | -3.047 | Highly Destabilizing | 0.999 | D | 0.869 | deleterious | D | 0.732582044 | None | None | N |
I/P | 0.9985 | likely_pathogenic | 0.9986 | pathogenic | -1.912 | Destabilizing | 0.999 | D | 0.863 | deleterious | None | None | None | None | N |
I/Q | 0.9951 | likely_pathogenic | 0.9954 | pathogenic | -2.867 | Highly Destabilizing | 0.999 | D | 0.877 | deleterious | None | None | None | None | N |
I/R | 0.9886 | likely_pathogenic | 0.9892 | pathogenic | -2.228 | Highly Destabilizing | 0.999 | D | 0.875 | deleterious | None | None | None | None | N |
I/S | 0.973 | likely_pathogenic | 0.9773 | pathogenic | -3.688 | Highly Destabilizing | 0.997 | D | 0.841 | deleterious | D | 0.790051282 | None | None | N |
I/T | 0.8732 | likely_pathogenic | 0.8952 | pathogenic | -3.293 | Highly Destabilizing | 0.978 | D | 0.771 | deleterious | D | 0.695907722 | None | None | N |
I/V | 0.1299 | likely_benign | 0.1366 | benign | -1.912 | Destabilizing | 0.198 | N | 0.287 | neutral | D | 0.543679767 | None | None | N |
I/W | 0.9948 | likely_pathogenic | 0.995 | pathogenic | -2.288 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
I/Y | 0.9847 | likely_pathogenic | 0.9856 | pathogenic | -2.074 | Highly Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.