Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15186 | 45781;45782;45783 | chr2:178621162;178621161;178621160 | chr2:179485889;179485888;179485887 |
N2AB | 13545 | 40858;40859;40860 | chr2:178621162;178621161;178621160 | chr2:179485889;179485888;179485887 |
N2A | 12618 | 38077;38078;38079 | chr2:178621162;178621161;178621160 | chr2:179485889;179485888;179485887 |
N2B | 6121 | 18586;18587;18588 | chr2:178621162;178621161;178621160 | chr2:179485889;179485888;179485887 |
Novex-1 | 6246 | 18961;18962;18963 | chr2:178621162;178621161;178621160 | chr2:179485889;179485888;179485887 |
Novex-2 | 6313 | 19162;19163;19164 | chr2:178621162;178621161;178621160 | chr2:179485889;179485888;179485887 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/T | rs878910401 | None | 0.002 | N | 0.127 | 0.257 | None | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.274 | likely_benign | 0.2397 | benign | -1.776 | Destabilizing | 0.001 | N | 0.123 | neutral | None | None | None | None | N |
M/C | 0.8274 | likely_pathogenic | 0.732 | pathogenic | -1.259 | Destabilizing | 0.968 | D | 0.465 | neutral | None | None | None | None | N |
M/D | 0.7838 | likely_pathogenic | 0.7515 | pathogenic | -0.62 | Destabilizing | 0.111 | N | 0.284 | neutral | None | None | None | None | N |
M/E | 0.2823 | likely_benign | 0.2868 | benign | -0.603 | Destabilizing | 0.001 | N | 0.181 | neutral | None | None | None | None | N |
M/F | 0.6013 | likely_pathogenic | 0.549 | ambiguous | -0.856 | Destabilizing | 0.738 | D | 0.425 | neutral | None | None | None | None | N |
M/G | 0.5707 | likely_pathogenic | 0.4944 | ambiguous | -2.078 | Highly Destabilizing | 0.001 | N | 0.262 | neutral | None | None | None | None | N |
M/H | 0.6399 | likely_pathogenic | 0.5968 | pathogenic | -1.109 | Destabilizing | 0.908 | D | 0.55 | neutral | None | None | None | None | N |
M/I | 0.4184 | ambiguous | 0.4123 | ambiguous | -1.001 | Destabilizing | 0.302 | N | 0.365 | neutral | N | 0.481799312 | None | None | N |
M/K | 0.1755 | likely_benign | 0.1656 | benign | -0.584 | Destabilizing | 0.086 | N | 0.255 | neutral | N | 0.479078255 | None | None | N |
M/L | 0.2466 | likely_benign | 0.22 | benign | -1.001 | Destabilizing | 0.039 | N | 0.25 | neutral | N | 0.44767135 | None | None | N |
M/N | 0.4673 | ambiguous | 0.4273 | ambiguous | -0.421 | Destabilizing | 0.365 | N | 0.335 | neutral | None | None | None | None | N |
M/P | 0.9473 | likely_pathogenic | 0.9349 | pathogenic | -1.233 | Destabilizing | 0.538 | D | 0.409 | neutral | None | None | None | None | N |
M/Q | 0.1937 | likely_benign | 0.1856 | benign | -0.537 | Destabilizing | 0.223 | N | 0.345 | neutral | None | None | None | None | N |
M/R | 0.2149 | likely_benign | 0.195 | benign | -0.06 | Destabilizing | 0.302 | N | 0.407 | neutral | N | 0.462554861 | None | None | N |
M/S | 0.3029 | likely_benign | 0.2641 | benign | -1.038 | Destabilizing | 0.051 | N | 0.257 | neutral | None | None | None | None | N |
M/T | 0.1328 | likely_benign | 0.1243 | benign | -0.913 | Destabilizing | 0.002 | N | 0.127 | neutral | N | 0.418439716 | None | None | N |
M/V | 0.1088 | likely_benign | 0.1079 | benign | -1.233 | Destabilizing | 0.086 | N | 0.266 | neutral | N | 0.465731854 | None | None | N |
M/W | 0.8546 | likely_pathogenic | 0.8301 | pathogenic | -0.769 | Destabilizing | 0.968 | D | 0.467 | neutral | None | None | None | None | N |
M/Y | 0.7868 | likely_pathogenic | 0.7409 | pathogenic | -0.797 | Destabilizing | 0.896 | D | 0.559 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.