Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15212 | 45859;45860;45861 | chr2:178620976;178620975;178620974 | chr2:179485703;179485702;179485701 |
N2AB | 13571 | 40936;40937;40938 | chr2:178620976;178620975;178620974 | chr2:179485703;179485702;179485701 |
N2A | 12644 | 38155;38156;38157 | chr2:178620976;178620975;178620974 | chr2:179485703;179485702;179485701 |
N2B | 6147 | 18664;18665;18666 | chr2:178620976;178620975;178620974 | chr2:179485703;179485702;179485701 |
Novex-1 | 6272 | 19039;19040;19041 | chr2:178620976;178620975;178620974 | chr2:179485703;179485702;179485701 |
Novex-2 | 6339 | 19240;19241;19242 | chr2:178620976;178620975;178620974 | chr2:179485703;179485702;179485701 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.003 | N | 0.123 | 0.084 | 0.401042353794 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1614 | likely_benign | 0.1763 | benign | -1.103 | Destabilizing | 0.08 | N | 0.194 | neutral | N | 0.479844238 | None | None | N |
V/C | 0.7795 | likely_pathogenic | 0.7487 | pathogenic | -0.773 | Destabilizing | 0.965 | D | 0.36 | neutral | None | None | None | None | N |
V/D | 0.3428 | ambiguous | 0.3527 | ambiguous | -1.067 | Destabilizing | 0.491 | N | 0.443 | neutral | N | 0.506871151 | None | None | N |
V/E | 0.2705 | likely_benign | 0.2703 | benign | -1.119 | Destabilizing | 0.561 | D | 0.386 | neutral | None | None | None | None | N |
V/F | 0.152 | likely_benign | 0.1394 | benign | -0.903 | Destabilizing | 0.772 | D | 0.404 | neutral | N | 0.508941464 | None | None | N |
V/G | 0.2571 | likely_benign | 0.2516 | benign | -1.345 | Destabilizing | 0.001 | N | 0.299 | neutral | N | 0.495574785 | None | None | N |
V/H | 0.4707 | ambiguous | 0.4677 | ambiguous | -0.81 | Destabilizing | 0.991 | D | 0.407 | neutral | None | None | None | None | N |
V/I | 0.0801 | likely_benign | 0.0851 | benign | -0.569 | Destabilizing | 0.003 | N | 0.123 | neutral | N | 0.473486191 | None | None | N |
V/K | 0.2852 | likely_benign | 0.2709 | benign | -1.091 | Destabilizing | 0.561 | D | 0.407 | neutral | None | None | None | None | N |
V/L | 0.1775 | likely_benign | 0.1817 | benign | -0.569 | Destabilizing | 0.08 | N | 0.215 | neutral | N | 0.487852958 | None | None | N |
V/M | 0.1404 | likely_benign | 0.1479 | benign | -0.457 | Destabilizing | 0.818 | D | 0.397 | neutral | None | None | None | None | N |
V/N | 0.1956 | likely_benign | 0.2105 | benign | -0.853 | Destabilizing | 0.561 | D | 0.433 | neutral | None | None | None | None | N |
V/P | 0.877 | likely_pathogenic | 0.8416 | pathogenic | -0.711 | Destabilizing | 0.901 | D | 0.429 | neutral | None | None | None | None | N |
V/Q | 0.286 | likely_benign | 0.2836 | benign | -1.082 | Destabilizing | 0.901 | D | 0.405 | neutral | None | None | None | None | N |
V/R | 0.2674 | likely_benign | 0.2477 | benign | -0.459 | Destabilizing | 0.901 | D | 0.449 | neutral | None | None | None | None | N |
V/S | 0.1575 | likely_benign | 0.1695 | benign | -1.257 | Destabilizing | 0.209 | N | 0.372 | neutral | None | None | None | None | N |
V/T | 0.1248 | likely_benign | 0.1405 | benign | -1.214 | Destabilizing | 0.002 | N | 0.127 | neutral | None | None | None | None | N |
V/W | 0.8305 | likely_pathogenic | 0.8006 | pathogenic | -1.041 | Destabilizing | 0.991 | D | 0.441 | neutral | None | None | None | None | N |
V/Y | 0.5373 | ambiguous | 0.5174 | ambiguous | -0.779 | Destabilizing | 0.965 | D | 0.381 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.