Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15219 | 45880;45881;45882 | chr2:178620955;178620954;178620953 | chr2:179485682;179485681;179485680 |
N2AB | 13578 | 40957;40958;40959 | chr2:178620955;178620954;178620953 | chr2:179485682;179485681;179485680 |
N2A | 12651 | 38176;38177;38178 | chr2:178620955;178620954;178620953 | chr2:179485682;179485681;179485680 |
N2B | 6154 | 18685;18686;18687 | chr2:178620955;178620954;178620953 | chr2:179485682;179485681;179485680 |
Novex-1 | 6279 | 19060;19061;19062 | chr2:178620955;178620954;178620953 | chr2:179485682;179485681;179485680 |
Novex-2 | 6346 | 19261;19262;19263 | chr2:178620955;178620954;178620953 | chr2:179485682;179485681;179485680 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs765315826 | -0.654 | 0.996 | D | 0.509 | 0.489 | 0.666835787278 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.65E-05 | 0 | 0 |
V/M | rs765315826 | -0.654 | 0.996 | D | 0.509 | 0.489 | 0.666835787278 | gnomAD-4.0.0 | 1.59445E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88402E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3377 | likely_benign | 0.2839 | benign | -1.932 | Destabilizing | 0.061 | N | 0.139 | neutral | N | 0.49848103 | None | None | N |
V/C | 0.824 | likely_pathogenic | 0.7916 | pathogenic | -1.331 | Destabilizing | 0.999 | D | 0.517 | neutral | None | None | None | None | N |
V/D | 0.8631 | likely_pathogenic | 0.7259 | pathogenic | -2.211 | Highly Destabilizing | 0.991 | D | 0.604 | neutral | None | None | None | None | N |
V/E | 0.7112 | likely_pathogenic | 0.555 | ambiguous | -2.141 | Highly Destabilizing | 0.959 | D | 0.543 | neutral | D | 0.671836285 | None | None | N |
V/F | 0.4074 | ambiguous | 0.2927 | benign | -1.286 | Destabilizing | 0.997 | D | 0.582 | neutral | None | None | None | None | N |
V/G | 0.3819 | ambiguous | 0.2852 | benign | -2.321 | Highly Destabilizing | 0.015 | N | 0.329 | neutral | D | 0.590975194 | None | None | N |
V/H | 0.91 | likely_pathogenic | 0.8471 | pathogenic | -1.883 | Destabilizing | 0.999 | D | 0.552 | neutral | None | None | None | None | N |
V/I | 0.1086 | likely_benign | 0.1109 | benign | -0.915 | Destabilizing | 0.927 | D | 0.455 | neutral | None | None | None | None | N |
V/K | 0.7502 | likely_pathogenic | 0.6099 | pathogenic | -1.79 | Destabilizing | 0.939 | D | 0.544 | neutral | None | None | None | None | N |
V/L | 0.4023 | ambiguous | 0.3464 | ambiguous | -0.915 | Destabilizing | 0.826 | D | 0.438 | neutral | D | 0.627263437 | None | None | N |
V/M | 0.2947 | likely_benign | 0.2561 | benign | -0.747 | Destabilizing | 0.996 | D | 0.509 | neutral | D | 0.631578414 | None | None | N |
V/N | 0.7573 | likely_pathogenic | 0.6371 | pathogenic | -1.7 | Destabilizing | 0.991 | D | 0.592 | neutral | None | None | None | None | N |
V/P | 0.9651 | likely_pathogenic | 0.9345 | pathogenic | -1.224 | Destabilizing | 0.991 | D | 0.552 | neutral | None | None | None | None | N |
V/Q | 0.7037 | likely_pathogenic | 0.5695 | pathogenic | -1.796 | Destabilizing | 0.997 | D | 0.559 | neutral | None | None | None | None | N |
V/R | 0.7171 | likely_pathogenic | 0.5587 | ambiguous | -1.259 | Destabilizing | 0.991 | D | 0.597 | neutral | None | None | None | None | N |
V/S | 0.5253 | ambiguous | 0.437 | ambiguous | -2.221 | Highly Destabilizing | 0.884 | D | 0.461 | neutral | None | None | None | None | N |
V/T | 0.3622 | ambiguous | 0.3334 | benign | -2.047 | Highly Destabilizing | 0.939 | D | 0.437 | neutral | None | None | None | None | N |
V/W | 0.9585 | likely_pathogenic | 0.9192 | pathogenic | -1.606 | Destabilizing | 0.999 | D | 0.57 | neutral | None | None | None | None | N |
V/Y | 0.8672 | likely_pathogenic | 0.7763 | pathogenic | -1.327 | Destabilizing | 0.997 | D | 0.568 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.