Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15236 | 45931;45932;45933 | chr2:178620904;178620903;178620902 | chr2:179485631;179485630;179485629 |
N2AB | 13595 | 41008;41009;41010 | chr2:178620904;178620903;178620902 | chr2:179485631;179485630;179485629 |
N2A | 12668 | 38227;38228;38229 | chr2:178620904;178620903;178620902 | chr2:179485631;179485630;179485629 |
N2B | 6171 | 18736;18737;18738 | chr2:178620904;178620903;178620902 | chr2:179485631;179485630;179485629 |
Novex-1 | 6296 | 19111;19112;19113 | chr2:178620904;178620903;178620902 | chr2:179485631;179485630;179485629 |
Novex-2 | 6363 | 19312;19313;19314 | chr2:178620904;178620903;178620902 | chr2:179485631;179485630;179485629 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.034 | N | 0.437 | 0.12 | 0.208000267992 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.50964E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7748 | likely_pathogenic | 0.6884 | pathogenic | -0.956 | Destabilizing | 0.996 | D | 0.705 | prob.neutral | None | None | None | None | N |
A/D | 0.9666 | likely_pathogenic | 0.9491 | pathogenic | -0.694 | Destabilizing | 0.901 | D | 0.719 | prob.delet. | D | 0.571207194 | None | None | N |
A/E | 0.9388 | likely_pathogenic | 0.9145 | pathogenic | -0.714 | Destabilizing | 0.923 | D | 0.696 | prob.neutral | None | None | None | None | N |
A/F | 0.8742 | likely_pathogenic | 0.8149 | pathogenic | -0.972 | Destabilizing | 0.961 | D | 0.737 | prob.delet. | None | None | None | None | N |
A/G | 0.3925 | ambiguous | 0.3166 | benign | -1.148 | Destabilizing | 0.565 | D | 0.655 | neutral | N | 0.486785155 | None | None | N |
A/H | 0.9742 | likely_pathogenic | 0.963 | pathogenic | -1.224 | Destabilizing | 0.989 | D | 0.715 | prob.delet. | None | None | None | None | N |
A/I | 0.6553 | likely_pathogenic | 0.5434 | ambiguous | -0.289 | Destabilizing | 0.633 | D | 0.685 | prob.neutral | None | None | None | None | N |
A/K | 0.9845 | likely_pathogenic | 0.9754 | pathogenic | -1.011 | Destabilizing | 0.858 | D | 0.697 | prob.neutral | None | None | None | None | N |
A/L | 0.6148 | likely_pathogenic | 0.5139 | ambiguous | -0.289 | Destabilizing | 0.633 | D | 0.649 | neutral | None | None | None | None | N |
A/M | 0.7413 | likely_pathogenic | 0.6295 | pathogenic | -0.317 | Destabilizing | 0.989 | D | 0.694 | prob.neutral | None | None | None | None | N |
A/N | 0.9241 | likely_pathogenic | 0.8855 | pathogenic | -0.737 | Destabilizing | 0.858 | D | 0.739 | prob.delet. | None | None | None | None | N |
A/P | 0.8271 | likely_pathogenic | 0.82 | pathogenic | -0.442 | Destabilizing | 0.949 | D | 0.726 | prob.delet. | N | 0.43122105 | None | None | N |
A/Q | 0.9353 | likely_pathogenic | 0.9113 | pathogenic | -0.848 | Destabilizing | 0.923 | D | 0.711 | prob.delet. | None | None | None | None | N |
A/R | 0.9611 | likely_pathogenic | 0.9444 | pathogenic | -0.737 | Destabilizing | 0.923 | D | 0.726 | prob.delet. | None | None | None | None | N |
A/S | 0.2713 | likely_benign | 0.2267 | benign | -1.181 | Destabilizing | 0.075 | N | 0.411 | neutral | N | 0.502614011 | None | None | N |
A/T | 0.3655 | ambiguous | 0.2808 | benign | -1.083 | Destabilizing | 0.034 | N | 0.437 | neutral | N | 0.473551019 | None | None | N |
A/V | 0.3726 | ambiguous | 0.2853 | benign | -0.442 | Destabilizing | 0.075 | N | 0.412 | neutral | N | 0.459199745 | None | None | N |
A/W | 0.9853 | likely_pathogenic | 0.9781 | pathogenic | -1.265 | Destabilizing | 0.996 | D | 0.739 | prob.delet. | None | None | None | None | N |
A/Y | 0.9508 | likely_pathogenic | 0.9248 | pathogenic | -0.856 | Destabilizing | 0.987 | D | 0.726 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.