Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15244 | 45955;45956;45957 | chr2:178620880;178620879;178620878 | chr2:179485607;179485606;179485605 |
N2AB | 13603 | 41032;41033;41034 | chr2:178620880;178620879;178620878 | chr2:179485607;179485606;179485605 |
N2A | 12676 | 38251;38252;38253 | chr2:178620880;178620879;178620878 | chr2:179485607;179485606;179485605 |
N2B | 6179 | 18760;18761;18762 | chr2:178620880;178620879;178620878 | chr2:179485607;179485606;179485605 |
Novex-1 | 6304 | 19135;19136;19137 | chr2:178620880;178620879;178620878 | chr2:179485607;179485606;179485605 |
Novex-2 | 6371 | 19336;19337;19338 | chr2:178620880;178620879;178620878 | chr2:179485607;179485606;179485605 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs759829017 | 0.092 | 0.027 | N | 0.335 | 0.108 | 0.165133752707 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.95E-06 | 0 |
E/A | rs759829017 | 0.092 | 0.027 | N | 0.335 | 0.108 | 0.165133752707 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/A | rs759829017 | 0.092 | 0.027 | N | 0.335 | 0.108 | 0.165133752707 | gnomAD-4.0.0 | 5.13219E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.58672E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1804 | likely_benign | 0.1973 | benign | -0.66 | Destabilizing | 0.027 | N | 0.335 | neutral | N | 0.453933624 | None | None | N |
E/C | 0.8645 | likely_pathogenic | 0.8789 | pathogenic | -0.279 | Destabilizing | 0.935 | D | 0.408 | neutral | None | None | None | None | N |
E/D | 0.0751 | likely_benign | 0.0856 | benign | -0.465 | Destabilizing | None | N | 0.139 | neutral | N | 0.402141526 | None | None | N |
E/F | 0.8187 | likely_pathogenic | 0.8284 | pathogenic | -0.399 | Destabilizing | 0.791 | D | 0.406 | neutral | None | None | None | None | N |
E/G | 0.0888 | likely_benign | 0.0928 | benign | -0.887 | Destabilizing | None | N | 0.179 | neutral | N | 0.332530399 | None | None | N |
E/H | 0.4483 | ambiguous | 0.4809 | ambiguous | -0.195 | Destabilizing | 0.555 | D | 0.341 | neutral | None | None | None | None | N |
E/I | 0.546 | ambiguous | 0.5838 | pathogenic | -0.081 | Destabilizing | 0.555 | D | 0.433 | neutral | None | None | None | None | N |
E/K | 0.1168 | likely_benign | 0.1206 | benign | -0.057 | Destabilizing | None | N | 0.153 | neutral | N | 0.446215387 | None | None | N |
E/L | 0.5356 | ambiguous | 0.5582 | ambiguous | -0.081 | Destabilizing | 0.149 | N | 0.477 | neutral | None | None | None | None | N |
E/M | 0.5419 | ambiguous | 0.5706 | pathogenic | 0.087 | Stabilizing | 0.935 | D | 0.39 | neutral | None | None | None | None | N |
E/N | 0.1381 | likely_benign | 0.16 | benign | -0.382 | Destabilizing | 0.002 | N | 0.161 | neutral | None | None | None | None | N |
E/P | 0.7196 | likely_pathogenic | 0.7392 | pathogenic | -0.254 | Destabilizing | 0.555 | D | 0.423 | neutral | None | None | None | None | N |
E/Q | 0.1454 | likely_benign | 0.1511 | benign | -0.331 | Destabilizing | 0.117 | N | 0.377 | neutral | N | 0.449100201 | None | None | N |
E/R | 0.215 | likely_benign | 0.2176 | benign | 0.257 | Stabilizing | 0.081 | N | 0.361 | neutral | None | None | None | None | N |
E/S | 0.1532 | likely_benign | 0.1698 | benign | -0.587 | Destabilizing | 0.035 | N | 0.286 | neutral | None | None | None | None | N |
E/T | 0.2454 | likely_benign | 0.2712 | benign | -0.402 | Destabilizing | 0.149 | N | 0.405 | neutral | None | None | None | None | N |
E/V | 0.3696 | ambiguous | 0.3961 | ambiguous | -0.254 | Destabilizing | 0.117 | N | 0.451 | neutral | N | 0.451541198 | None | None | N |
E/W | 0.8874 | likely_pathogenic | 0.8911 | pathogenic | -0.181 | Destabilizing | 0.935 | D | 0.459 | neutral | None | None | None | None | N |
E/Y | 0.6608 | likely_pathogenic | 0.6828 | pathogenic | -0.157 | Destabilizing | 0.791 | D | 0.395 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.