Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15254 | 45985;45986;45987 | chr2:178620850;178620849;178620848 | chr2:179485577;179485576;179485575 |
N2AB | 13613 | 41062;41063;41064 | chr2:178620850;178620849;178620848 | chr2:179485577;179485576;179485575 |
N2A | 12686 | 38281;38282;38283 | chr2:178620850;178620849;178620848 | chr2:179485577;179485576;179485575 |
N2B | 6189 | 18790;18791;18792 | chr2:178620850;178620849;178620848 | chr2:179485577;179485576;179485575 |
Novex-1 | 6314 | 19165;19166;19167 | chr2:178620850;178620849;178620848 | chr2:179485577;179485576;179485575 |
Novex-2 | 6381 | 19366;19367;19368 | chr2:178620850;178620849;178620848 | chr2:179485577;179485576;179485575 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | rs72677226 | -1.073 | 0.988 | D | 0.391 | 0.254 | 0.710200110468 | gnomAD-2.1.1 | 1.21199E-04 | None | None | None | None | I | None | 6.47E-05 | 8.4268E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/F | rs72677226 | -1.073 | 0.988 | D | 0.391 | 0.254 | 0.710200110468 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | I | None | 4.83E-05 | 1.96876E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/F | rs72677226 | -1.073 | 0.988 | D | 0.391 | 0.254 | 0.710200110468 | gnomAD-4.0.0 | 5.13194E-05 | None | None | None | None | I | None | 3.38972E-05 | 5.94167E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 8.54896E-05 |
I/M | None | None | 0.988 | N | 0.438 | 0.286 | 0.506552580704 | gnomAD-4.0.0 | 1.59356E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86259E-06 | 0 | 0 |
I/N | rs2058156310 | None | 0.988 | N | 0.526 | 0.552 | 0.842181085062 | gnomAD-3.1.2 | 6.6E-06 | None | None | None | None | I | None | 0 | 6.57E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/N | rs2058156310 | None | 0.988 | N | 0.526 | 0.552 | 0.842181085062 | gnomAD-4.0.0 | 6.5957E-06 | None | None | None | None | I | None | 0 | 6.57289E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs72677226 | -0.823 | 0.238 | N | 0.143 | 0.07 | 0.51759925163 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/V | rs72677226 | -0.823 | 0.238 | N | 0.143 | 0.07 | 0.51759925163 | gnomAD-4.0.0 | 1.59356E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43336E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4097 | ambiguous | 0.5162 | ambiguous | -2.206 | Highly Destabilizing | 0.864 | D | 0.332 | neutral | None | None | None | None | I |
I/C | 0.7287 | likely_pathogenic | 0.7696 | pathogenic | -1.737 | Destabilizing | 1.0 | D | 0.459 | neutral | None | None | None | None | I |
I/D | 0.736 | likely_pathogenic | 0.7939 | pathogenic | -1.949 | Destabilizing | 0.991 | D | 0.503 | neutral | None | None | None | None | I |
I/E | 0.6061 | likely_pathogenic | 0.6693 | pathogenic | -1.863 | Destabilizing | 0.991 | D | 0.479 | neutral | None | None | None | None | I |
I/F | 0.2116 | likely_benign | 0.2624 | benign | -1.451 | Destabilizing | 0.988 | D | 0.391 | neutral | D | 0.528805663 | None | None | I |
I/G | 0.7155 | likely_pathogenic | 0.7975 | pathogenic | -2.608 | Highly Destabilizing | 0.991 | D | 0.453 | neutral | None | None | None | None | I |
I/H | 0.4916 | ambiguous | 0.5717 | pathogenic | -1.791 | Destabilizing | 1.0 | D | 0.525 | neutral | None | None | None | None | I |
I/K | 0.4149 | ambiguous | 0.4712 | ambiguous | -1.539 | Destabilizing | 0.991 | D | 0.472 | neutral | None | None | None | None | I |
I/L | 0.1448 | likely_benign | 0.1636 | benign | -1.116 | Destabilizing | 0.03 | N | 0.127 | neutral | N | 0.497054773 | None | None | I |
I/M | 0.1145 | likely_benign | 0.1352 | benign | -1.111 | Destabilizing | 0.988 | D | 0.438 | neutral | N | 0.506712697 | None | None | I |
I/N | 0.2981 | likely_benign | 0.3736 | ambiguous | -1.533 | Destabilizing | 0.988 | D | 0.526 | neutral | N | 0.503278922 | None | None | I |
I/P | 0.9476 | likely_pathogenic | 0.9618 | pathogenic | -1.453 | Destabilizing | 0.995 | D | 0.524 | neutral | None | None | None | None | I |
I/Q | 0.4348 | ambiguous | 0.502 | ambiguous | -1.642 | Destabilizing | 0.995 | D | 0.525 | neutral | None | None | None | None | I |
I/R | 0.3117 | likely_benign | 0.3521 | ambiguous | -1.04 | Destabilizing | 0.995 | D | 0.531 | neutral | None | None | None | None | I |
I/S | 0.3148 | likely_benign | 0.3895 | ambiguous | -2.253 | Highly Destabilizing | 0.677 | D | 0.295 | neutral | N | 0.487356433 | None | None | I |
I/T | 0.2625 | likely_benign | 0.353 | ambiguous | -2.042 | Highly Destabilizing | 0.921 | D | 0.318 | neutral | N | 0.492924332 | None | None | I |
I/V | 0.0773 | likely_benign | 0.1008 | benign | -1.453 | Destabilizing | 0.238 | N | 0.143 | neutral | N | 0.441841628 | None | None | I |
I/W | 0.8131 | likely_pathogenic | 0.8339 | pathogenic | -1.568 | Destabilizing | 1.0 | D | 0.596 | neutral | None | None | None | None | I |
I/Y | 0.5354 | ambiguous | 0.581 | pathogenic | -1.342 | Destabilizing | 0.999 | D | 0.461 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.