Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15266 | 46021;46022;46023 | chr2:178620814;178620813;178620812 | chr2:179485541;179485540;179485539 |
N2AB | 13625 | 41098;41099;41100 | chr2:178620814;178620813;178620812 | chr2:179485541;179485540;179485539 |
N2A | 12698 | 38317;38318;38319 | chr2:178620814;178620813;178620812 | chr2:179485541;179485540;179485539 |
N2B | 6201 | 18826;18827;18828 | chr2:178620814;178620813;178620812 | chr2:179485541;179485540;179485539 |
Novex-1 | 6326 | 19201;19202;19203 | chr2:178620814;178620813;178620812 | chr2:179485541;179485540;179485539 |
Novex-2 | 6393 | 19402;19403;19404 | chr2:178620814;178620813;178620812 | chr2:179485541;179485540;179485539 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | rs1214768698 | -3.058 | 0.681 | D | 0.861 | 0.751 | 0.805582790611 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 0 |
I/N | rs1214768698 | -3.058 | 0.681 | D | 0.861 | 0.751 | 0.805582790611 | gnomAD-4.0.0 | 1.59328E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77747E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9784 | likely_pathogenic | 0.974 | pathogenic | -3.162 | Highly Destabilizing | 0.25 | N | 0.678 | prob.neutral | None | None | None | None | N |
I/C | 0.9685 | likely_pathogenic | 0.9613 | pathogenic | -2.317 | Highly Destabilizing | 0.992 | D | 0.795 | deleterious | None | None | None | None | N |
I/D | 0.9981 | likely_pathogenic | 0.9972 | pathogenic | -3.888 | Highly Destabilizing | 0.85 | D | 0.847 | deleterious | None | None | None | None | N |
I/E | 0.9931 | likely_pathogenic | 0.9898 | pathogenic | -3.562 | Highly Destabilizing | 0.85 | D | 0.829 | deleterious | None | None | None | None | N |
I/F | 0.5206 | ambiguous | 0.5133 | ambiguous | -1.939 | Destabilizing | 0.81 | D | 0.698 | prob.neutral | D | 0.675986986 | None | None | N |
I/G | 0.9938 | likely_pathogenic | 0.9916 | pathogenic | -3.772 | Highly Destabilizing | 0.739 | D | 0.823 | deleterious | None | None | None | None | N |
I/H | 0.9827 | likely_pathogenic | 0.9763 | pathogenic | -3.367 | Highly Destabilizing | 0.977 | D | 0.865 | deleterious | None | None | None | None | N |
I/K | 0.9767 | likely_pathogenic | 0.9615 | pathogenic | -2.617 | Highly Destabilizing | 0.739 | D | 0.827 | deleterious | None | None | None | None | N |
I/L | 0.3084 | likely_benign | 0.3433 | ambiguous | -1.311 | Destabilizing | 0.002 | N | 0.335 | neutral | D | 0.664372796 | None | None | N |
I/M | 0.3131 | likely_benign | 0.316 | benign | -1.407 | Destabilizing | 0.81 | D | 0.673 | neutral | D | 0.698838017 | None | None | N |
I/N | 0.967 | likely_pathogenic | 0.955 | pathogenic | -3.346 | Highly Destabilizing | 0.681 | D | 0.861 | deleterious | D | 0.73337305 | None | None | N |
I/P | 0.9977 | likely_pathogenic | 0.9966 | pathogenic | -1.921 | Destabilizing | 0.92 | D | 0.867 | deleterious | None | None | None | None | N |
I/Q | 0.982 | likely_pathogenic | 0.9739 | pathogenic | -3.002 | Highly Destabilizing | 0.85 | D | 0.863 | deleterious | None | None | None | None | N |
I/R | 0.9696 | likely_pathogenic | 0.9521 | pathogenic | -2.543 | Highly Destabilizing | 0.85 | D | 0.868 | deleterious | None | None | None | None | N |
I/S | 0.9753 | likely_pathogenic | 0.9658 | pathogenic | -3.903 | Highly Destabilizing | 0.036 | N | 0.568 | neutral | D | 0.73337305 | None | None | N |
I/T | 0.9798 | likely_pathogenic | 0.9756 | pathogenic | -3.417 | Highly Destabilizing | 0.379 | N | 0.697 | prob.neutral | D | 0.69675238 | None | None | N |
I/V | 0.213 | likely_benign | 0.2355 | benign | -1.921 | Destabilizing | 0.016 | N | 0.327 | neutral | D | 0.611297621 | None | None | N |
I/W | 0.9752 | likely_pathogenic | 0.9689 | pathogenic | -2.355 | Highly Destabilizing | 0.992 | D | 0.856 | deleterious | None | None | None | None | N |
I/Y | 0.9259 | likely_pathogenic | 0.9001 | pathogenic | -2.189 | Highly Destabilizing | 0.92 | D | 0.789 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.