Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1529 | 4810;4811;4812 | chr2:178777480;178777479;178777478 | chr2:179642207;179642206;179642205 |
N2AB | 1529 | 4810;4811;4812 | chr2:178777480;178777479;178777478 | chr2:179642207;179642206;179642205 |
N2A | 1529 | 4810;4811;4812 | chr2:178777480;178777479;178777478 | chr2:179642207;179642206;179642205 |
N2B | 1483 | 4672;4673;4674 | chr2:178777480;178777479;178777478 | chr2:179642207;179642206;179642205 |
Novex-1 | 1483 | 4672;4673;4674 | chr2:178777480;178777479;178777478 | chr2:179642207;179642206;179642205 |
Novex-2 | 1483 | 4672;4673;4674 | chr2:178777480;178777479;178777478 | chr2:179642207;179642206;179642205 |
Novex-3 | 1529 | 4810;4811;4812 | chr2:178777480;178777479;178777478 | chr2:179642207;179642206;179642205 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.009 | D | 0.38 | 0.411 | 0.497021753114 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
T/S | None | None | 0.379 | N | 0.482 | 0.237 | 0.289098819767 | gnomAD-4.0.0 | 1.36832E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99344E-07 | 0 | 1.65623E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1271 | likely_benign | 0.1396 | benign | -1.438 | Destabilizing | 0.002 | N | 0.183 | neutral | D | 0.571672247 | None | None | I |
T/C | 0.5491 | ambiguous | 0.5941 | pathogenic | -0.815 | Destabilizing | 0.977 | D | 0.541 | neutral | None | None | None | None | I |
T/D | 0.6327 | likely_pathogenic | 0.6692 | pathogenic | -0.941 | Destabilizing | 0.92 | D | 0.515 | neutral | None | None | None | None | I |
T/E | 0.4023 | ambiguous | 0.4299 | ambiguous | -0.728 | Destabilizing | 0.85 | D | 0.507 | neutral | None | None | None | None | I |
T/F | 0.421 | ambiguous | 0.4418 | ambiguous | -1.19 | Destabilizing | 0.85 | D | 0.62 | neutral | None | None | None | None | I |
T/G | 0.4732 | ambiguous | 0.521 | ambiguous | -1.828 | Destabilizing | 0.447 | N | 0.523 | neutral | None | None | None | None | I |
T/H | 0.3073 | likely_benign | 0.3262 | benign | -1.719 | Destabilizing | 0.992 | D | 0.629 | neutral | None | None | None | None | I |
T/I | 0.2259 | likely_benign | 0.246 | benign | -0.402 | Destabilizing | 0.009 | N | 0.38 | neutral | D | 0.597221595 | None | None | I |
T/K | 0.2335 | likely_benign | 0.2497 | benign | -0.062 | Destabilizing | 0.85 | D | 0.506 | neutral | None | None | None | None | I |
T/L | 0.1548 | likely_benign | 0.1697 | benign | -0.402 | Destabilizing | 0.103 | N | 0.473 | neutral | None | None | None | None | I |
T/M | 0.0906 | likely_benign | 0.0944 | benign | -0.483 | Destabilizing | 0.85 | D | 0.555 | neutral | None | None | None | None | I |
T/N | 0.1802 | likely_benign | 0.1959 | benign | -0.659 | Destabilizing | 0.896 | D | 0.479 | neutral | D | 0.676499294 | None | None | I |
T/P | 0.9297 | likely_pathogenic | 0.9447 | pathogenic | -0.721 | Destabilizing | 0.896 | D | 0.545 | neutral | D | 0.764493422 | None | None | I |
T/Q | 0.2361 | likely_benign | 0.254 | benign | -0.481 | Destabilizing | 0.92 | D | 0.558 | neutral | None | None | None | None | I |
T/R | 0.1967 | likely_benign | 0.209 | benign | -0.319 | Destabilizing | 0.85 | D | 0.545 | neutral | None | None | None | None | I |
T/S | 0.1606 | likely_benign | 0.1728 | benign | -1.049 | Destabilizing | 0.379 | N | 0.482 | neutral | N | 0.510147617 | None | None | I |
T/V | 0.1733 | likely_benign | 0.1907 | benign | -0.721 | Destabilizing | 0.005 | N | 0.278 | neutral | None | None | None | None | I |
T/W | 0.7663 | likely_pathogenic | 0.7822 | pathogenic | -1.169 | Destabilizing | 0.992 | D | 0.684 | prob.neutral | None | None | None | None | I |
T/Y | 0.4743 | ambiguous | 0.4868 | ambiguous | -0.827 | Destabilizing | 0.92 | D | 0.64 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.