Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15312 | 46159;46160;46161 | chr2:178620587;178620586;178620585 | chr2:179485314;179485313;179485312 |
N2AB | 13671 | 41236;41237;41238 | chr2:178620587;178620586;178620585 | chr2:179485314;179485313;179485312 |
N2A | 12744 | 38455;38456;38457 | chr2:178620587;178620586;178620585 | chr2:179485314;179485313;179485312 |
N2B | 6247 | 18964;18965;18966 | chr2:178620587;178620586;178620585 | chr2:179485314;179485313;179485312 |
Novex-1 | 6372 | 19339;19340;19341 | chr2:178620587;178620586;178620585 | chr2:179485314;179485313;179485312 |
Novex-2 | 6439 | 19540;19541;19542 | chr2:178620587;178620586;178620585 | chr2:179485314;179485313;179485312 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.978 | N | 0.508 | 0.447 | 0.416581338634 | gnomAD-4.0.0 | 1.59785E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86878E-06 | 0 | 0 |
E/Q | rs748340315 | 0.024 | 0.989 | N | 0.484 | 0.294 | 0.409124616982 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.3E-05 | None | 0 | 0 | 0 |
E/Q | rs748340315 | 0.024 | 0.989 | N | 0.484 | 0.294 | 0.409124616982 | gnomAD-4.0.0 | 3.19569E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.87737E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4095 | ambiguous | 0.3844 | ambiguous | -0.308 | Destabilizing | 0.989 | D | 0.486 | neutral | N | 0.514475193 | None | None | N |
E/C | 0.9611 | likely_pathogenic | 0.9666 | pathogenic | -0.145 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
E/D | 0.3756 | ambiguous | 0.4184 | ambiguous | -0.352 | Destabilizing | 0.054 | N | 0.186 | neutral | N | 0.508310303 | None | None | N |
E/F | 0.9442 | likely_pathogenic | 0.9421 | pathogenic | 0.05 | Stabilizing | 0.999 | D | 0.638 | neutral | None | None | None | None | N |
E/G | 0.5271 | ambiguous | 0.4992 | ambiguous | -0.535 | Destabilizing | 0.978 | D | 0.487 | neutral | D | 0.587997354 | None | None | N |
E/H | 0.8184 | likely_pathogenic | 0.7932 | pathogenic | 0.364 | Stabilizing | 0.999 | D | 0.463 | neutral | None | None | None | None | N |
E/I | 0.7016 | likely_pathogenic | 0.7094 | pathogenic | 0.266 | Stabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | N |
E/K | 0.3908 | ambiguous | 0.3171 | benign | 0.454 | Stabilizing | 0.978 | D | 0.508 | neutral | N | 0.498845922 | None | None | N |
E/L | 0.7722 | likely_pathogenic | 0.7605 | pathogenic | 0.266 | Stabilizing | 0.998 | D | 0.605 | neutral | None | None | None | None | N |
E/M | 0.7795 | likely_pathogenic | 0.772 | pathogenic | 0.225 | Stabilizing | 1.0 | D | 0.565 | neutral | None | None | None | None | N |
E/N | 0.6469 | likely_pathogenic | 0.6462 | pathogenic | -0.125 | Destabilizing | 0.983 | D | 0.474 | neutral | None | None | None | None | N |
E/P | 0.8861 | likely_pathogenic | 0.8938 | pathogenic | 0.096 | Stabilizing | 0.999 | D | 0.521 | neutral | None | None | None | None | N |
E/Q | 0.29 | likely_benign | 0.2639 | benign | -0.044 | Destabilizing | 0.989 | D | 0.484 | neutral | N | 0.510570465 | None | None | N |
E/R | 0.5606 | ambiguous | 0.4842 | ambiguous | 0.725 | Stabilizing | 0.998 | D | 0.477 | neutral | None | None | None | None | N |
E/S | 0.4837 | ambiguous | 0.4738 | ambiguous | -0.245 | Destabilizing | 0.983 | D | 0.477 | neutral | None | None | None | None | N |
E/T | 0.477 | ambiguous | 0.4568 | ambiguous | -0.043 | Destabilizing | 0.992 | D | 0.485 | neutral | None | None | None | None | N |
E/V | 0.4694 | ambiguous | 0.4702 | ambiguous | 0.096 | Stabilizing | 0.999 | D | 0.508 | neutral | N | 0.501957243 | None | None | N |
E/W | 0.9809 | likely_pathogenic | 0.9795 | pathogenic | 0.266 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/Y | 0.8987 | likely_pathogenic | 0.8875 | pathogenic | 0.32 | Stabilizing | 0.999 | D | 0.595 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.