Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15313 | 46162;46163;46164 | chr2:178620584;178620583;178620582 | chr2:179485311;179485310;179485309 |
N2AB | 13672 | 41239;41240;41241 | chr2:178620584;178620583;178620582 | chr2:179485311;179485310;179485309 |
N2A | 12745 | 38458;38459;38460 | chr2:178620584;178620583;178620582 | chr2:179485311;179485310;179485309 |
N2B | 6248 | 18967;18968;18969 | chr2:178620584;178620583;178620582 | chr2:179485311;179485310;179485309 |
Novex-1 | 6373 | 19342;19343;19344 | chr2:178620584;178620583;178620582 | chr2:179485311;179485310;179485309 |
Novex-2 | 6440 | 19543;19544;19545 | chr2:178620584;178620583;178620582 | chr2:179485311;179485310;179485309 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs2058109086 | None | 0.999 | N | 0.722 | 0.424 | 0.48300943003 | gnomAD-4.0.0 | 6.85359E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00487E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1631 | likely_benign | 0.1252 | benign | -0.97 | Destabilizing | 0.981 | D | 0.487 | neutral | N | 0.490924545 | None | None | N |
T/C | 0.6391 | likely_pathogenic | 0.5932 | pathogenic | -0.688 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
T/D | 0.8063 | likely_pathogenic | 0.7357 | pathogenic | -0.932 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | N |
T/E | 0.7253 | likely_pathogenic | 0.6227 | pathogenic | -0.806 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | N |
T/F | 0.6964 | likely_pathogenic | 0.5677 | pathogenic | -0.504 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
T/G | 0.5078 | ambiguous | 0.4723 | ambiguous | -1.362 | Destabilizing | 0.997 | D | 0.645 | neutral | None | None | None | None | N |
T/H | 0.7794 | likely_pathogenic | 0.6568 | pathogenic | -1.529 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
T/I | 0.3931 | ambiguous | 0.3023 | benign | 0.033 | Stabilizing | 0.999 | D | 0.722 | prob.delet. | N | 0.481849509 | None | None | N |
T/K | 0.6972 | likely_pathogenic | 0.5535 | ambiguous | -0.944 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | N | 0.512650691 | None | None | N |
T/L | 0.3388 | likely_benign | 0.2501 | benign | 0.033 | Stabilizing | 0.998 | D | 0.656 | neutral | None | None | None | None | N |
T/M | 0.1915 | likely_benign | 0.1394 | benign | 0.111 | Stabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
T/N | 0.3899 | ambiguous | 0.3157 | benign | -1.244 | Destabilizing | 0.999 | D | 0.754 | deleterious | None | None | None | None | N |
T/P | 0.8664 | likely_pathogenic | 0.8271 | pathogenic | -0.268 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | D | 0.575650028 | None | None | N |
T/Q | 0.6359 | likely_pathogenic | 0.5216 | ambiguous | -1.131 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
T/R | 0.649 | likely_pathogenic | 0.4777 | ambiguous | -0.98 | Destabilizing | 0.999 | D | 0.706 | prob.neutral | D | 0.533919147 | None | None | N |
T/S | 0.305 | likely_benign | 0.261 | benign | -1.492 | Destabilizing | 0.905 | D | 0.343 | neutral | N | 0.511407629 | None | None | N |
T/V | 0.2711 | likely_benign | 0.2252 | benign | -0.268 | Destabilizing | 0.998 | D | 0.619 | neutral | None | None | None | None | N |
T/W | 0.9334 | likely_pathogenic | 0.8757 | pathogenic | -0.582 | Destabilizing | 1.0 | D | 0.638 | neutral | None | None | None | None | N |
T/Y | 0.7309 | likely_pathogenic | 0.6009 | pathogenic | -0.309 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.