Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15332 | 46219;46220;46221 | chr2:178620527;178620526;178620525 | chr2:179485254;179485253;179485252 |
N2AB | 13691 | 41296;41297;41298 | chr2:178620527;178620526;178620525 | chr2:179485254;179485253;179485252 |
N2A | 12764 | 38515;38516;38517 | chr2:178620527;178620526;178620525 | chr2:179485254;179485253;179485252 |
N2B | 6267 | 19024;19025;19026 | chr2:178620527;178620526;178620525 | chr2:179485254;179485253;179485252 |
Novex-1 | 6392 | 19399;19400;19401 | chr2:178620527;178620526;178620525 | chr2:179485254;179485253;179485252 |
Novex-2 | 6459 | 19600;19601;19602 | chr2:178620527;178620526;178620525 | chr2:179485254;179485253;179485252 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | None | None | 0.997 | N | 0.745 | 0.253 | 0.584212540733 | gnomAD-4.0.0 | 6.84812E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00037E-07 | 0 | 0 |
L/P | None | None | 0.999 | N | 0.818 | 0.77 | 0.885213830694 | gnomAD-4.0.0 | 1.3696E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80004E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7724 | likely_pathogenic | 0.7193 | pathogenic | -2.506 | Highly Destabilizing | 0.966 | D | 0.657 | neutral | None | None | None | None | N |
L/C | 0.8114 | likely_pathogenic | 0.7981 | pathogenic | -1.648 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
L/D | 0.9981 | likely_pathogenic | 0.996 | pathogenic | -3.158 | Highly Destabilizing | 0.999 | D | 0.821 | deleterious | None | None | None | None | N |
L/E | 0.9854 | likely_pathogenic | 0.9693 | pathogenic | -2.897 | Highly Destabilizing | 0.998 | D | 0.814 | deleterious | None | None | None | None | N |
L/F | 0.7717 | likely_pathogenic | 0.7134 | pathogenic | -1.631 | Destabilizing | 0.998 | D | 0.779 | deleterious | None | None | None | None | N |
L/G | 0.9537 | likely_pathogenic | 0.9374 | pathogenic | -3.02 | Highly Destabilizing | 0.998 | D | 0.814 | deleterious | None | None | None | None | N |
L/H | 0.9825 | likely_pathogenic | 0.965 | pathogenic | -2.446 | Highly Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
L/I | 0.1765 | likely_benign | 0.1452 | benign | -0.987 | Destabilizing | 0.921 | D | 0.585 | neutral | None | None | None | None | N |
L/K | 0.9811 | likely_pathogenic | 0.9656 | pathogenic | -2.012 | Highly Destabilizing | 0.998 | D | 0.815 | deleterious | None | None | None | None | N |
L/M | 0.3116 | likely_benign | 0.2702 | benign | -0.885 | Destabilizing | 0.997 | D | 0.745 | deleterious | N | 0.512298486 | None | None | N |
L/N | 0.9841 | likely_pathogenic | 0.9715 | pathogenic | -2.532 | Highly Destabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | N |
L/P | 0.9373 | likely_pathogenic | 0.9008 | pathogenic | -1.482 | Destabilizing | 0.999 | D | 0.818 | deleterious | N | 0.514823397 | None | None | N |
L/Q | 0.953 | likely_pathogenic | 0.9061 | pathogenic | -2.34 | Highly Destabilizing | 0.999 | D | 0.838 | deleterious | N | 0.514823397 | None | None | N |
L/R | 0.9688 | likely_pathogenic | 0.944 | pathogenic | -1.876 | Destabilizing | 0.999 | D | 0.825 | deleterious | N | 0.514823397 | None | None | N |
L/S | 0.9614 | likely_pathogenic | 0.9215 | pathogenic | -3.102 | Highly Destabilizing | 0.998 | D | 0.817 | deleterious | None | None | None | None | N |
L/T | 0.8032 | likely_pathogenic | 0.7121 | pathogenic | -2.692 | Highly Destabilizing | 0.995 | D | 0.771 | deleterious | None | None | None | None | N |
L/V | 0.1289 | likely_benign | 0.1017 | benign | -1.482 | Destabilizing | 0.117 | N | 0.348 | neutral | N | 0.332346474 | None | None | N |
L/W | 0.9753 | likely_pathogenic | 0.9532 | pathogenic | -1.973 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
L/Y | 0.9796 | likely_pathogenic | 0.969 | pathogenic | -1.679 | Destabilizing | 0.999 | D | 0.774 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.