Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15337 | 46234;46235;46236 | chr2:178620512;178620511;178620510 | chr2:179485239;179485238;179485237 |
N2AB | 13696 | 41311;41312;41313 | chr2:178620512;178620511;178620510 | chr2:179485239;179485238;179485237 |
N2A | 12769 | 38530;38531;38532 | chr2:178620512;178620511;178620510 | chr2:179485239;179485238;179485237 |
N2B | 6272 | 19039;19040;19041 | chr2:178620512;178620511;178620510 | chr2:179485239;179485238;179485237 |
Novex-1 | 6397 | 19414;19415;19416 | chr2:178620512;178620511;178620510 | chr2:179485239;179485238;179485237 |
Novex-2 | 6464 | 19615;19616;19617 | chr2:178620512;178620511;178620510 | chr2:179485239;179485238;179485237 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | 0.996 | D | 0.41 | 0.322 | 0.238096912614 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
N/I | rs762315032 | 0.101 | 0.988 | D | 0.462 | 0.34 | 0.528461186488 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14758E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
N/I | rs762315032 | 0.101 | 0.988 | D | 0.462 | 0.34 | 0.528461186488 | gnomAD-4.0.0 | 1.71198E-05 | None | None | None | None | N | None | 2.99473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.16011E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.5144 | ambiguous | 0.4618 | ambiguous | -0.671 | Destabilizing | 0.079 | N | 0.185 | neutral | None | None | None | None | N |
N/C | 0.5674 | likely_pathogenic | 0.5859 | pathogenic | 0.193 | Stabilizing | 0.999 | D | 0.46 | neutral | None | None | None | None | N |
N/D | 0.1987 | likely_benign | 0.1693 | benign | 0.291 | Stabilizing | 0.92 | D | 0.385 | neutral | N | 0.433670543 | None | None | N |
N/E | 0.6265 | likely_pathogenic | 0.5568 | ambiguous | 0.295 | Stabilizing | 0.939 | D | 0.34 | neutral | None | None | None | None | N |
N/F | 0.8144 | likely_pathogenic | 0.7959 | pathogenic | -0.859 | Destabilizing | 0.997 | D | 0.477 | neutral | None | None | None | None | N |
N/G | 0.4307 | ambiguous | 0.403 | ambiguous | -0.894 | Destabilizing | 0.759 | D | 0.327 | neutral | None | None | None | None | N |
N/H | 0.2614 | likely_benign | 0.2485 | benign | -0.776 | Destabilizing | 0.996 | D | 0.41 | neutral | D | 0.572518071 | None | None | N |
N/I | 0.6909 | likely_pathogenic | 0.6101 | pathogenic | -0.152 | Destabilizing | 0.988 | D | 0.462 | neutral | D | 0.573769035 | None | None | N |
N/K | 0.512 | ambiguous | 0.4508 | ambiguous | 0.077 | Stabilizing | 0.92 | D | 0.34 | neutral | N | 0.503160311 | None | None | N |
N/L | 0.5719 | likely_pathogenic | 0.5489 | ambiguous | -0.152 | Destabilizing | 0.939 | D | 0.452 | neutral | None | None | None | None | N |
N/M | 0.6116 | likely_pathogenic | 0.57 | pathogenic | 0.239 | Stabilizing | 0.999 | D | 0.448 | neutral | None | None | None | None | N |
N/P | 0.9806 | likely_pathogenic | 0.9745 | pathogenic | -0.297 | Destabilizing | 0.991 | D | 0.436 | neutral | None | None | None | None | N |
N/Q | 0.5387 | ambiguous | 0.5136 | ambiguous | -0.433 | Destabilizing | 0.991 | D | 0.379 | neutral | None | None | None | None | N |
N/R | 0.5451 | ambiguous | 0.5109 | ambiguous | 0.111 | Stabilizing | 0.969 | D | 0.378 | neutral | None | None | None | None | N |
N/S | 0.2059 | likely_benign | 0.1815 | benign | -0.353 | Destabilizing | 0.31 | N | 0.105 | neutral | N | 0.458389998 | None | None | N |
N/T | 0.4907 | ambiguous | 0.4232 | ambiguous | -0.174 | Destabilizing | 0.704 | D | 0.331 | neutral | D | 0.572518071 | None | None | N |
N/V | 0.6985 | likely_pathogenic | 0.6349 | pathogenic | -0.297 | Destabilizing | 0.939 | D | 0.485 | neutral | None | None | None | None | N |
N/W | 0.896 | likely_pathogenic | 0.8866 | pathogenic | -0.709 | Destabilizing | 0.999 | D | 0.559 | neutral | None | None | None | None | N |
N/Y | 0.2928 | likely_benign | 0.277 | benign | -0.489 | Destabilizing | 0.996 | D | 0.465 | neutral | D | 0.573769035 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.