Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15338 | 46237;46238;46239 | chr2:178620509;178620508;178620507 | chr2:179485236;179485235;179485234 |
N2AB | 13697 | 41314;41315;41316 | chr2:178620509;178620508;178620507 | chr2:179485236;179485235;179485234 |
N2A | 12770 | 38533;38534;38535 | chr2:178620509;178620508;178620507 | chr2:179485236;179485235;179485234 |
N2B | 6273 | 19042;19043;19044 | chr2:178620509;178620508;178620507 | chr2:179485236;179485235;179485234 |
Novex-1 | 6398 | 19417;19418;19419 | chr2:178620509;178620508;178620507 | chr2:179485236;179485235;179485234 |
Novex-2 | 6465 | 19618;19619;19620 | chr2:178620509;178620508;178620507 | chr2:179485236;179485235;179485234 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | None | None | 1.0 | D | 0.673 | 0.546 | 0.223847106136 | gnomAD-4.0.0 | 6.84774E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.0002E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4515 | ambiguous | 0.3774 | ambiguous | -0.266 | Destabilizing | 1.0 | D | 0.581 | neutral | D | 0.590771935 | None | None | N |
G/C | 0.5477 | ambiguous | 0.454 | ambiguous | -0.881 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | D | 0.656368091 | None | None | N |
G/D | 0.342 | ambiguous | 0.2692 | benign | -0.695 | Destabilizing | 1.0 | D | 0.653 | neutral | N | 0.498505864 | None | None | N |
G/E | 0.4261 | ambiguous | 0.3289 | benign | -0.87 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
G/F | 0.9097 | likely_pathogenic | 0.8742 | pathogenic | -1.051 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
G/H | 0.6521 | likely_pathogenic | 0.574 | pathogenic | -0.441 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
G/I | 0.825 | likely_pathogenic | 0.7321 | pathogenic | -0.486 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
G/K | 0.5814 | likely_pathogenic | 0.4904 | ambiguous | -0.778 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
G/L | 0.8391 | likely_pathogenic | 0.7963 | pathogenic | -0.486 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | N |
G/M | 0.8155 | likely_pathogenic | 0.7699 | pathogenic | -0.486 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
G/N | 0.3985 | ambiguous | 0.3615 | ambiguous | -0.444 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
G/P | 0.992 | likely_pathogenic | 0.9863 | pathogenic | -0.383 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | N |
G/Q | 0.482 | ambiguous | 0.4195 | ambiguous | -0.76 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
G/R | 0.4706 | ambiguous | 0.3576 | ambiguous | -0.289 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | D | 0.65370118 | None | None | N |
G/S | 0.2283 | likely_benign | 0.1869 | benign | -0.554 | Destabilizing | 1.0 | D | 0.673 | neutral | D | 0.588194396 | None | None | N |
G/T | 0.5185 | ambiguous | 0.4461 | ambiguous | -0.667 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
G/V | 0.7615 | likely_pathogenic | 0.6411 | pathogenic | -0.383 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | D | 0.656368091 | None | None | N |
G/W | 0.7636 | likely_pathogenic | 0.6556 | pathogenic | -1.174 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
G/Y | 0.814 | likely_pathogenic | 0.7345 | pathogenic | -0.844 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.