Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15344 | 46255;46256;46257 | chr2:178620491;178620490;178620489 | chr2:179485218;179485217;179485216 |
N2AB | 13703 | 41332;41333;41334 | chr2:178620491;178620490;178620489 | chr2:179485218;179485217;179485216 |
N2A | 12776 | 38551;38552;38553 | chr2:178620491;178620490;178620489 | chr2:179485218;179485217;179485216 |
N2B | 6279 | 19060;19061;19062 | chr2:178620491;178620490;178620489 | chr2:179485218;179485217;179485216 |
Novex-1 | 6404 | 19435;19436;19437 | chr2:178620491;178620490;178620489 | chr2:179485218;179485217;179485216 |
Novex-2 | 6471 | 19636;19637;19638 | chr2:178620491;178620490;178620489 | chr2:179485218;179485217;179485216 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.454 | N | 0.333 | 0.138 | 0.134241683229 | gnomAD-4.0.0 | 1.59412E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88331E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4376 | ambiguous | 0.4408 | ambiguous | -0.307 | Destabilizing | 0.454 | N | 0.375 | neutral | D | 0.525033376 | None | None | N |
D/C | 0.7374 | likely_pathogenic | 0.7531 | pathogenic | -0.034 | Destabilizing | 0.998 | D | 0.477 | neutral | None | None | None | None | N |
D/E | 0.4282 | ambiguous | 0.4835 | ambiguous | -0.297 | Destabilizing | 0.625 | D | 0.361 | neutral | N | 0.456232475 | None | None | N |
D/F | 0.8286 | likely_pathogenic | 0.8136 | pathogenic | -0.228 | Destabilizing | 0.991 | D | 0.466 | neutral | None | None | None | None | N |
D/G | 0.2339 | likely_benign | 0.2292 | benign | -0.508 | Destabilizing | 0.454 | N | 0.333 | neutral | N | 0.44285326 | None | None | N |
D/H | 0.4719 | ambiguous | 0.4902 | ambiguous | -0.093 | Destabilizing | 0.966 | D | 0.316 | neutral | D | 0.527540822 | None | None | N |
D/I | 0.7513 | likely_pathogenic | 0.7664 | pathogenic | 0.176 | Stabilizing | 0.974 | D | 0.474 | neutral | None | None | None | None | N |
D/K | 0.657 | likely_pathogenic | 0.6685 | pathogenic | 0.209 | Stabilizing | 0.842 | D | 0.295 | neutral | None | None | None | None | N |
D/L | 0.6468 | likely_pathogenic | 0.6455 | pathogenic | 0.176 | Stabilizing | 0.974 | D | 0.435 | neutral | None | None | None | None | N |
D/M | 0.864 | likely_pathogenic | 0.8734 | pathogenic | 0.29 | Stabilizing | 0.998 | D | 0.45 | neutral | None | None | None | None | N |
D/N | 0.1418 | likely_benign | 0.1471 | benign | -0.078 | Destabilizing | 0.005 | N | 0.169 | neutral | N | 0.443154174 | None | None | N |
D/P | 0.8654 | likely_pathogenic | 0.8778 | pathogenic | 0.037 | Stabilizing | 0.974 | D | 0.316 | neutral | None | None | None | None | N |
D/Q | 0.6127 | likely_pathogenic | 0.6467 | pathogenic | -0.033 | Destabilizing | 0.974 | D | 0.321 | neutral | None | None | None | None | N |
D/R | 0.6669 | likely_pathogenic | 0.6835 | pathogenic | 0.38 | Stabilizing | 0.949 | D | 0.411 | neutral | None | None | None | None | N |
D/S | 0.1743 | likely_benign | 0.1759 | benign | -0.19 | Destabilizing | 0.08 | N | 0.175 | neutral | None | None | None | None | N |
D/T | 0.3712 | ambiguous | 0.3776 | ambiguous | -0.033 | Destabilizing | 0.728 | D | 0.325 | neutral | None | None | None | None | N |
D/V | 0.5625 | ambiguous | 0.5817 | pathogenic | 0.037 | Stabilizing | 0.966 | D | 0.449 | neutral | N | 0.488358509 | None | None | N |
D/W | 0.953 | likely_pathogenic | 0.9514 | pathogenic | -0.099 | Destabilizing | 0.998 | D | 0.597 | neutral | None | None | None | None | N |
D/Y | 0.5035 | ambiguous | 0.5107 | ambiguous | None | Stabilizing | 0.989 | D | 0.464 | neutral | D | 0.529045571 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.