Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15348 | 46267;46268;46269 | chr2:178620479;178620478;178620477 | chr2:179485206;179485205;179485204 |
N2AB | 13707 | 41344;41345;41346 | chr2:178620479;178620478;178620477 | chr2:179485206;179485205;179485204 |
N2A | 12780 | 38563;38564;38565 | chr2:178620479;178620478;178620477 | chr2:179485206;179485205;179485204 |
N2B | 6283 | 19072;19073;19074 | chr2:178620479;178620478;178620477 | chr2:179485206;179485205;179485204 |
Novex-1 | 6408 | 19447;19448;19449 | chr2:178620479;178620478;178620477 | chr2:179485206;179485205;179485204 |
Novex-2 | 6475 | 19648;19649;19650 | chr2:178620479;178620478;178620477 | chr2:179485206;179485205;179485204 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | rs766291551 | -0.709 | 0.001 | N | 0.256 | 0.082 | 0.0846915920261 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.95E-06 | 0 |
S/A | rs766291551 | -0.709 | 0.001 | N | 0.256 | 0.082 | 0.0846915920261 | gnomAD-4.0.0 | 1.59412E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.0303E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0882 | likely_benign | 0.103 | benign | -0.874 | Destabilizing | 0.001 | N | 0.256 | neutral | N | 0.466653008 | None | None | N |
S/C | 0.1044 | likely_benign | 0.1319 | benign | -0.665 | Destabilizing | 0.245 | N | 0.365 | neutral | None | None | None | None | N |
S/D | 0.3921 | ambiguous | 0.4645 | ambiguous | -0.792 | Destabilizing | 0.044 | N | 0.307 | neutral | None | None | None | None | N |
S/E | 0.3613 | ambiguous | 0.4611 | ambiguous | -0.697 | Destabilizing | 0.009 | N | 0.277 | neutral | None | None | None | None | N |
S/F | 0.1362 | likely_benign | 0.1685 | benign | -0.917 | Destabilizing | 0.022 | N | 0.483 | neutral | None | None | None | None | N |
S/G | 0.1359 | likely_benign | 0.1642 | benign | -1.204 | Destabilizing | 0.018 | N | 0.297 | neutral | None | None | None | None | N |
S/H | 0.1933 | likely_benign | 0.2342 | benign | -1.671 | Destabilizing | 0.245 | N | 0.366 | neutral | None | None | None | None | N |
S/I | 0.0979 | likely_benign | 0.1234 | benign | -0.076 | Destabilizing | None | N | 0.189 | neutral | None | None | None | None | N |
S/K | 0.4079 | ambiguous | 0.5067 | ambiguous | -0.521 | Destabilizing | 0.009 | N | 0.277 | neutral | None | None | None | None | N |
S/L | 0.0802 | likely_benign | 0.0978 | benign | -0.076 | Destabilizing | None | N | 0.155 | neutral | N | 0.375998722 | None | None | N |
S/M | 0.1359 | likely_benign | 0.1803 | benign | 0.059 | Stabilizing | 0.074 | N | 0.45 | neutral | None | None | None | None | N |
S/N | 0.1293 | likely_benign | 0.1607 | benign | -0.838 | Destabilizing | 0.044 | N | 0.336 | neutral | None | None | None | None | N |
S/P | 0.7931 | likely_pathogenic | 0.8711 | pathogenic | -0.307 | Destabilizing | 0.065 | N | 0.419 | neutral | N | 0.503273754 | None | None | N |
S/Q | 0.2769 | likely_benign | 0.3649 | ambiguous | -0.82 | Destabilizing | 0.002 | N | 0.164 | neutral | None | None | None | None | N |
S/R | 0.3519 | ambiguous | 0.4282 | ambiguous | -0.671 | Destabilizing | 0.044 | N | 0.413 | neutral | None | None | None | None | N |
S/T | 0.0708 | likely_benign | 0.0914 | benign | -0.7 | Destabilizing | None | N | 0.121 | neutral | N | 0.467074638 | None | None | N |
S/V | 0.109 | likely_benign | 0.1476 | benign | -0.307 | Destabilizing | None | N | 0.162 | neutral | None | None | None | None | N |
S/W | 0.2242 | likely_benign | 0.2695 | benign | -0.989 | Destabilizing | 0.788 | D | 0.451 | neutral | None | None | None | None | N |
S/Y | 0.1391 | likely_benign | 0.1592 | benign | -0.638 | Destabilizing | 0.085 | N | 0.499 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.