Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15359 | 46300;46301;46302 | chr2:178620446;178620445;178620444 | chr2:179485173;179485172;179485171 |
N2AB | 13718 | 41377;41378;41379 | chr2:178620446;178620445;178620444 | chr2:179485173;179485172;179485171 |
N2A | 12791 | 38596;38597;38598 | chr2:178620446;178620445;178620444 | chr2:179485173;179485172;179485171 |
N2B | 6294 | 19105;19106;19107 | chr2:178620446;178620445;178620444 | chr2:179485173;179485172;179485171 |
Novex-1 | 6419 | 19480;19481;19482 | chr2:178620446;178620445;178620444 | chr2:179485173;179485172;179485171 |
Novex-2 | 6486 | 19681;19682;19683 | chr2:178620446;178620445;178620444 | chr2:179485173;179485172;179485171 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | rs780024396 | -1.058 | 0.741 | N | 0.52 | 0.215 | 0.307016933798 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
T/N | rs780024396 | -1.058 | 0.741 | N | 0.52 | 0.215 | 0.307016933798 | gnomAD-4.0.0 | 3.18866E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72833E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.123 | likely_benign | 0.1273 | benign | -1.002 | Destabilizing | 0.027 | N | 0.447 | neutral | D | 0.557084038 | None | None | N |
T/C | 0.3989 | ambiguous | 0.4452 | ambiguous | -0.845 | Destabilizing | 0.935 | D | 0.539 | neutral | None | None | None | None | N |
T/D | 0.4806 | ambiguous | 0.5256 | ambiguous | -0.682 | Destabilizing | 0.555 | D | 0.547 | neutral | None | None | None | None | N |
T/E | 0.3377 | likely_benign | 0.3905 | ambiguous | -0.637 | Destabilizing | 0.262 | N | 0.531 | neutral | None | None | None | None | N |
T/F | 0.1852 | likely_benign | 0.2184 | benign | -1.064 | Destabilizing | 0.38 | N | 0.575 | neutral | None | None | None | None | N |
T/G | 0.3871 | ambiguous | 0.4098 | ambiguous | -1.284 | Destabilizing | 0.262 | N | 0.547 | neutral | None | None | None | None | N |
T/H | 0.2092 | likely_benign | 0.2404 | benign | -1.559 | Destabilizing | 0.935 | D | 0.587 | neutral | None | None | None | None | N |
T/I | 0.0817 | likely_benign | 0.1038 | benign | -0.329 | Destabilizing | None | N | 0.337 | neutral | N | 0.437656235 | None | None | N |
T/K | 0.2505 | likely_benign | 0.2693 | benign | -0.732 | Destabilizing | 0.555 | D | 0.541 | neutral | None | None | None | None | N |
T/L | 0.0851 | likely_benign | 0.0918 | benign | -0.329 | Destabilizing | 0.005 | N | 0.405 | neutral | None | None | None | None | N |
T/M | 0.0855 | likely_benign | 0.0939 | benign | -0.055 | Destabilizing | 0.38 | N | 0.551 | neutral | None | None | None | None | N |
T/N | 0.1342 | likely_benign | 0.1484 | benign | -0.885 | Destabilizing | 0.741 | D | 0.52 | neutral | N | 0.510315526 | None | None | N |
T/P | 0.7883 | likely_pathogenic | 0.7043 | pathogenic | -0.522 | Destabilizing | 0.741 | D | 0.549 | neutral | D | 0.60221455 | None | None | N |
T/Q | 0.2296 | likely_benign | 0.2568 | benign | -1.042 | Destabilizing | 0.791 | D | 0.555 | neutral | None | None | None | None | N |
T/R | 0.1897 | likely_benign | 0.1936 | benign | -0.564 | Destabilizing | 0.555 | D | 0.543 | neutral | None | None | None | None | N |
T/S | 0.1381 | likely_benign | 0.1534 | benign | -1.174 | Destabilizing | 0.117 | N | 0.533 | neutral | N | 0.508173517 | None | None | N |
T/V | 0.091 | likely_benign | 0.1105 | benign | -0.522 | Destabilizing | None | N | 0.232 | neutral | None | None | None | None | N |
T/W | 0.5244 | ambiguous | 0.5509 | ambiguous | -0.986 | Destabilizing | 0.935 | D | 0.619 | neutral | None | None | None | None | N |
T/Y | 0.2274 | likely_benign | 0.2544 | benign | -0.714 | Destabilizing | 0.555 | D | 0.575 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.