Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15360 | 46303;46304;46305 | chr2:178620443;178620442;178620441 | chr2:179485170;179485169;179485168 |
N2AB | 13719 | 41380;41381;41382 | chr2:178620443;178620442;178620441 | chr2:179485170;179485169;179485168 |
N2A | 12792 | 38599;38600;38601 | chr2:178620443;178620442;178620441 | chr2:179485170;179485169;179485168 |
N2B | 6295 | 19108;19109;19110 | chr2:178620443;178620442;178620441 | chr2:179485170;179485169;179485168 |
Novex-1 | 6420 | 19483;19484;19485 | chr2:178620443;178620442;178620441 | chr2:179485170;179485169;179485168 |
Novex-2 | 6487 | 19684;19685;19686 | chr2:178620443;178620442;178620441 | chr2:179485170;179485169;179485168 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs746352388 | -1.467 | 0.998 | D | 0.685 | 0.614 | 0.666064869456 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
I/M | rs746352388 | -1.467 | 0.998 | D | 0.685 | 0.614 | 0.666064869456 | gnomAD-4.0.0 | 3.18877E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72849E-06 | 0 | 0 |
I/T | rs1465320800 | -3.013 | 0.989 | D | 0.755 | 0.76 | 0.844994757482 | gnomAD-2.1.1 | 1.43E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.14E-05 | 0 |
I/T | rs1465320800 | -3.013 | 0.989 | D | 0.755 | 0.76 | 0.844994757482 | gnomAD-3.1.2 | 1.98E-05 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.95E-05 | 0 | 0 |
I/T | rs1465320800 | -3.013 | 0.989 | D | 0.755 | 0.76 | 0.844994757482 | gnomAD-4.0.0 | 1.92282E-05 | None | None | None | None | N | None | 1.33711E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54473E-05 | 0 | 0 |
I/V | rs758542642 | -1.454 | 0.333 | D | 0.263 | 0.425 | 0.717905595574 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/V | rs758542642 | -1.454 | 0.333 | D | 0.263 | 0.425 | 0.717905595574 | gnomAD-4.0.0 | 1.59436E-06 | None | None | None | None | N | None | 0 | 2.29085E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9652 | likely_pathogenic | 0.9668 | pathogenic | -3.056 | Highly Destabilizing | 0.992 | D | 0.686 | prob.neutral | None | None | None | None | N |
I/C | 0.9777 | likely_pathogenic | 0.982 | pathogenic | -2.843 | Highly Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
I/D | 0.9987 | likely_pathogenic | 0.9985 | pathogenic | -3.528 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
I/E | 0.9935 | likely_pathogenic | 0.9922 | pathogenic | -3.26 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
I/F | 0.6647 | likely_pathogenic | 0.6949 | pathogenic | -1.913 | Destabilizing | 0.998 | D | 0.727 | prob.delet. | D | 0.738147982 | None | None | N |
I/G | 0.9953 | likely_pathogenic | 0.9955 | pathogenic | -3.657 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
I/H | 0.9902 | likely_pathogenic | 0.9903 | pathogenic | -3.106 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
I/K | 0.9807 | likely_pathogenic | 0.9804 | pathogenic | -2.545 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
I/L | 0.3331 | likely_benign | 0.3472 | ambiguous | -1.285 | Destabilizing | 0.889 | D | 0.401 | neutral | D | 0.604315515 | None | None | N |
I/M | 0.3937 | ambiguous | 0.4058 | ambiguous | -1.507 | Destabilizing | 0.998 | D | 0.685 | prob.neutral | D | 0.679476999 | None | None | N |
I/N | 0.9805 | likely_pathogenic | 0.9785 | pathogenic | -3.049 | Highly Destabilizing | 0.999 | D | 0.859 | deleterious | D | 0.736612995 | None | None | N |
I/P | 0.9981 | likely_pathogenic | 0.9979 | pathogenic | -1.86 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
I/Q | 0.9842 | likely_pathogenic | 0.9838 | pathogenic | -2.84 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
I/R | 0.9717 | likely_pathogenic | 0.9707 | pathogenic | -2.272 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
I/S | 0.9759 | likely_pathogenic | 0.9746 | pathogenic | -3.794 | Highly Destabilizing | 0.998 | D | 0.831 | deleterious | D | 0.736612995 | None | None | N |
I/T | 0.9687 | likely_pathogenic | 0.9693 | pathogenic | -3.359 | Highly Destabilizing | 0.989 | D | 0.755 | deleterious | D | 0.736799314 | None | None | N |
I/V | 0.1462 | likely_benign | 0.1558 | benign | -1.86 | Destabilizing | 0.333 | N | 0.263 | neutral | D | 0.644070135 | None | None | N |
I/W | 0.9874 | likely_pathogenic | 0.9903 | pathogenic | -2.281 | Highly Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
I/Y | 0.9592 | likely_pathogenic | 0.9612 | pathogenic | -2.071 | Highly Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.