Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15363 | 46312;46313;46314 | chr2:178620434;178620433;178620432 | chr2:179485161;179485160;179485159 |
N2AB | 13722 | 41389;41390;41391 | chr2:178620434;178620433;178620432 | chr2:179485161;179485160;179485159 |
N2A | 12795 | 38608;38609;38610 | chr2:178620434;178620433;178620432 | chr2:179485161;179485160;179485159 |
N2B | 6298 | 19117;19118;19119 | chr2:178620434;178620433;178620432 | chr2:179485161;179485160;179485159 |
Novex-1 | 6423 | 19492;19493;19494 | chr2:178620434;178620433;178620432 | chr2:179485161;179485160;179485159 |
Novex-2 | 6490 | 19693;19694;19695 | chr2:178620434;178620433;178620432 | chr2:179485161;179485160;179485159 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/G | None | None | 0.698 | D | 0.695 | 0.467 | 0.831465730767 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.6249 | likely_pathogenic | 0.5596 | ambiguous | -0.945 | Destabilizing | 0.559 | D | 0.441 | neutral | None | None | None | None | N |
C/D | 0.9931 | likely_pathogenic | 0.992 | pathogenic | -1.375 | Destabilizing | 0.956 | D | 0.742 | deleterious | None | None | None | None | N |
C/E | 0.9971 | likely_pathogenic | 0.9964 | pathogenic | -1.247 | Destabilizing | 0.956 | D | 0.746 | deleterious | None | None | None | None | N |
C/F | 0.8831 | likely_pathogenic | 0.8964 | pathogenic | -0.891 | Destabilizing | 0.97 | D | 0.711 | prob.delet. | D | 0.614105393 | None | None | N |
C/G | 0.6198 | likely_pathogenic | 0.5406 | ambiguous | -1.214 | Destabilizing | 0.698 | D | 0.695 | prob.neutral | D | 0.573970628 | None | None | N |
C/H | 0.987 | likely_pathogenic | 0.9878 | pathogenic | -1.783 | Destabilizing | 0.998 | D | 0.739 | prob.delet. | None | None | None | None | N |
C/I | 0.7876 | likely_pathogenic | 0.8069 | pathogenic | -0.282 | Destabilizing | 0.978 | D | 0.695 | prob.neutral | None | None | None | None | N |
C/K | 0.9975 | likely_pathogenic | 0.9973 | pathogenic | -0.583 | Destabilizing | 0.956 | D | 0.739 | prob.delet. | None | None | None | None | N |
C/L | 0.8349 | likely_pathogenic | 0.8181 | pathogenic | -0.282 | Destabilizing | 0.86 | D | 0.595 | neutral | None | None | None | None | N |
C/M | 0.9331 | likely_pathogenic | 0.9263 | pathogenic | 0.203 | Stabilizing | 0.998 | D | 0.676 | prob.neutral | None | None | None | None | N |
C/N | 0.9686 | likely_pathogenic | 0.9616 | pathogenic | -0.918 | Destabilizing | 0.956 | D | 0.749 | deleterious | None | None | None | None | N |
C/P | 0.9799 | likely_pathogenic | 0.9827 | pathogenic | -0.476 | Destabilizing | 0.978 | D | 0.759 | deleterious | None | None | None | None | N |
C/Q | 0.9915 | likely_pathogenic | 0.9909 | pathogenic | -0.815 | Destabilizing | 0.956 | D | 0.758 | deleterious | None | None | None | None | N |
C/R | 0.978 | likely_pathogenic | 0.9792 | pathogenic | -0.784 | Destabilizing | 0.942 | D | 0.751 | deleterious | D | 0.573970628 | None | None | N |
C/S | 0.6777 | likely_pathogenic | 0.6192 | pathogenic | -1.107 | Destabilizing | 0.058 | N | 0.451 | neutral | N | 0.507704101 | None | None | N |
C/T | 0.6927 | likely_pathogenic | 0.6037 | pathogenic | -0.822 | Destabilizing | 0.754 | D | 0.618 | neutral | None | None | None | None | N |
C/V | 0.6025 | likely_pathogenic | 0.596 | pathogenic | -0.476 | Destabilizing | 0.86 | D | 0.65 | neutral | None | None | None | None | N |
C/W | 0.9821 | likely_pathogenic | 0.985 | pathogenic | -1.25 | Destabilizing | 0.997 | D | 0.699 | prob.neutral | D | 0.615971616 | None | None | N |
C/Y | 0.9655 | likely_pathogenic | 0.9685 | pathogenic | -0.912 | Destabilizing | 0.99 | D | 0.723 | prob.delet. | D | 0.61478752 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.