Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15368 | 46327;46328;46329 | chr2:178620419;178620418;178620417 | chr2:179485146;179485145;179485144 |
N2AB | 13727 | 41404;41405;41406 | chr2:178620419;178620418;178620417 | chr2:179485146;179485145;179485144 |
N2A | 12800 | 38623;38624;38625 | chr2:178620419;178620418;178620417 | chr2:179485146;179485145;179485144 |
N2B | 6303 | 19132;19133;19134 | chr2:178620419;178620418;178620417 | chr2:179485146;179485145;179485144 |
Novex-1 | 6428 | 19507;19508;19509 | chr2:178620419;178620418;178620417 | chr2:179485146;179485145;179485144 |
Novex-2 | 6495 | 19708;19709;19710 | chr2:178620419;178620418;178620417 | chr2:179485146;179485145;179485144 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.999 | N | 0.684 | 0.553 | 0.464442853059 | gnomAD-4.0.0 | 1.59442E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86418E-06 | 0 | 0 |
E/K | None | None | 0.999 | D | 0.591 | 0.445 | 0.479893544335 | gnomAD-4.0.0 | 1.59446E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86428E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4414 | ambiguous | 0.4158 | ambiguous | -0.956 | Destabilizing | 0.999 | D | 0.684 | prob.neutral | N | 0.500368154 | None | None | N |
E/C | 0.9741 | likely_pathogenic | 0.9748 | pathogenic | -0.486 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
E/D | 0.7895 | likely_pathogenic | 0.7632 | pathogenic | -1.106 | Destabilizing | 0.999 | D | 0.52 | neutral | D | 0.548296432 | None | None | N |
E/F | 0.9793 | likely_pathogenic | 0.974 | pathogenic | -0.251 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
E/G | 0.6127 | likely_pathogenic | 0.5864 | pathogenic | -1.352 | Destabilizing | 1.0 | D | 0.774 | deleterious | D | 0.549363348 | None | None | N |
E/H | 0.9423 | likely_pathogenic | 0.9212 | pathogenic | -0.469 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
E/I | 0.8492 | likely_pathogenic | 0.7898 | pathogenic | 0.137 | Stabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
E/K | 0.5422 | ambiguous | 0.416 | ambiguous | -0.624 | Destabilizing | 0.999 | D | 0.591 | neutral | D | 0.532895693 | None | None | N |
E/L | 0.9119 | likely_pathogenic | 0.8784 | pathogenic | 0.137 | Stabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
E/M | 0.8533 | likely_pathogenic | 0.8061 | pathogenic | 0.628 | Stabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
E/N | 0.8788 | likely_pathogenic | 0.8531 | pathogenic | -1.215 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
E/P | 0.9934 | likely_pathogenic | 0.9921 | pathogenic | -0.207 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
E/Q | 0.3922 | ambiguous | 0.3208 | benign | -1.045 | Destabilizing | 1.0 | D | 0.633 | neutral | N | 0.516057993 | None | None | N |
E/R | 0.6834 | likely_pathogenic | 0.587 | pathogenic | -0.316 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
E/S | 0.6611 | likely_pathogenic | 0.629 | pathogenic | -1.559 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | N |
E/T | 0.6936 | likely_pathogenic | 0.6184 | pathogenic | -1.219 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
E/V | 0.7178 | likely_pathogenic | 0.6286 | pathogenic | -0.207 | Destabilizing | 1.0 | D | 0.847 | deleterious | D | 0.53549795 | None | None | N |
E/W | 0.9952 | likely_pathogenic | 0.9936 | pathogenic | 0.054 | Stabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
E/Y | 0.9666 | likely_pathogenic | 0.9541 | pathogenic | 0.026 | Stabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.