Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15374 | 46345;46346;46347 | chr2:178620401;178620400;178620399 | chr2:179485128;179485127;179485126 |
N2AB | 13733 | 41422;41423;41424 | chr2:178620401;178620400;178620399 | chr2:179485128;179485127;179485126 |
N2A | 12806 | 38641;38642;38643 | chr2:178620401;178620400;178620399 | chr2:179485128;179485127;179485126 |
N2B | 6309 | 19150;19151;19152 | chr2:178620401;178620400;178620399 | chr2:179485128;179485127;179485126 |
Novex-1 | 6434 | 19525;19526;19527 | chr2:178620401;178620400;178620399 | chr2:179485128;179485127;179485126 |
Novex-2 | 6501 | 19726;19727;19728 | chr2:178620401;178620400;178620399 | chr2:179485128;179485127;179485126 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1313103090 | None | 0.024 | N | 0.431 | 0.09 | 0.236278675362 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/A | rs1313103090 | None | 0.024 | N | 0.431 | 0.09 | 0.236278675362 | gnomAD-4.0.0 | 6.58293E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47267E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1102 | likely_benign | 0.1044 | benign | -1.008 | Destabilizing | 0.024 | N | 0.431 | neutral | N | 0.49237478 | None | None | N |
T/C | 0.3981 | ambiguous | 0.4172 | ambiguous | -0.73 | Destabilizing | 0.628 | D | 0.505 | neutral | None | None | None | None | N |
T/D | 0.4589 | ambiguous | 0.415 | ambiguous | -0.768 | Destabilizing | 0.136 | N | 0.531 | neutral | None | None | None | None | N |
T/E | 0.2681 | likely_benign | 0.2629 | benign | -0.701 | Destabilizing | 0.136 | N | 0.509 | neutral | None | None | None | None | N |
T/F | 0.2522 | likely_benign | 0.2318 | benign | -0.813 | Destabilizing | None | N | 0.486 | neutral | None | None | None | None | N |
T/G | 0.3835 | ambiguous | 0.3651 | ambiguous | -1.336 | Destabilizing | 0.136 | N | 0.546 | neutral | None | None | None | None | N |
T/H | 0.2424 | likely_benign | 0.2431 | benign | -1.55 | Destabilizing | 0.214 | N | 0.535 | neutral | None | None | None | None | N |
T/I | 0.1534 | likely_benign | 0.1485 | benign | -0.198 | Destabilizing | None | N | 0.289 | neutral | N | 0.424500793 | None | None | N |
T/K | 0.2185 | likely_benign | 0.2215 | benign | -0.877 | Destabilizing | 0.072 | N | 0.51 | neutral | None | None | None | None | N |
T/L | 0.1186 | likely_benign | 0.1117 | benign | -0.198 | Destabilizing | 0.002 | N | 0.365 | neutral | None | None | None | None | N |
T/M | 0.0897 | likely_benign | 0.0901 | benign | 0.026 | Stabilizing | 0.007 | N | 0.372 | neutral | None | None | None | None | N |
T/N | 0.1699 | likely_benign | 0.1503 | benign | -1.026 | Destabilizing | 0.295 | N | 0.539 | neutral | N | 0.49262601 | None | None | N |
T/P | 0.5266 | ambiguous | 0.5065 | ambiguous | -0.435 | Destabilizing | 0.56 | D | 0.531 | neutral | N | 0.514037374 | None | None | N |
T/Q | 0.2131 | likely_benign | 0.2155 | benign | -1.102 | Destabilizing | 0.356 | N | 0.535 | neutral | None | None | None | None | N |
T/R | 0.1807 | likely_benign | 0.1772 | benign | -0.74 | Destabilizing | 0.356 | N | 0.531 | neutral | None | None | None | None | N |
T/S | 0.1441 | likely_benign | 0.1319 | benign | -1.304 | Destabilizing | 0.055 | N | 0.523 | neutral | N | 0.479640412 | None | None | N |
T/V | 0.13 | likely_benign | 0.1293 | benign | -0.435 | Destabilizing | None | N | 0.279 | neutral | None | None | None | None | N |
T/W | 0.5431 | ambiguous | 0.5406 | ambiguous | -0.777 | Destabilizing | 0.676 | D | 0.531 | neutral | None | None | None | None | N |
T/Y | 0.2728 | likely_benign | 0.2626 | benign | -0.528 | Destabilizing | None | N | 0.494 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.