Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15383 | 46372;46373;46374 | chr2:178620374;178620373;178620372 | chr2:179485101;179485100;179485099 |
N2AB | 13742 | 41449;41450;41451 | chr2:178620374;178620373;178620372 | chr2:179485101;179485100;179485099 |
N2A | 12815 | 38668;38669;38670 | chr2:178620374;178620373;178620372 | chr2:179485101;179485100;179485099 |
N2B | 6318 | 19177;19178;19179 | chr2:178620374;178620373;178620372 | chr2:179485101;179485100;179485099 |
Novex-1 | 6443 | 19552;19553;19554 | chr2:178620374;178620373;178620372 | chr2:179485101;179485100;179485099 |
Novex-2 | 6510 | 19753;19754;19755 | chr2:178620374;178620373;178620372 | chr2:179485101;179485100;179485099 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs773073914 | None | 0.865 | N | 0.524 | 0.186 | None | gnomAD-4.0.0 | 6.854E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.0052E-07 | 0 | 0 |
E/Q | rs773073914 | -0.909 | 0.284 | N | 0.235 | 0.128 | 0.159798565429 | gnomAD-2.1.1 | 1.08E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.58E-05 | 1.41563E-04 |
E/Q | rs773073914 | -0.909 | 0.284 | N | 0.235 | 0.128 | 0.159798565429 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 0 | 6.57E-05 | 0 | 0 | 0 | None | 0 | 0 | 4.42E-05 | 0 | 0 |
E/Q | rs773073914 | -0.909 | 0.284 | N | 0.235 | 0.128 | 0.159798565429 | gnomAD-4.0.0 | 3.35225E-05 | None | None | None | None | N | None | 0 | 1.67398E-05 | None | 0 | 0 | None | 0 | 0 | 4.24311E-05 | 0 | 4.81217E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4564 | ambiguous | 0.4415 | ambiguous | -0.863 | Destabilizing | 0.865 | D | 0.65 | neutral | N | 0.486170681 | None | None | N |
E/C | 0.952 | likely_pathogenic | 0.9573 | pathogenic | -0.408 | Destabilizing | 0.999 | D | 0.758 | deleterious | None | None | None | None | N |
E/D | 0.3398 | likely_benign | 0.3853 | ambiguous | -1.042 | Destabilizing | 0.928 | D | 0.474 | neutral | N | 0.437284274 | None | None | N |
E/F | 0.924 | likely_pathogenic | 0.9303 | pathogenic | -0.27 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
E/G | 0.4765 | ambiguous | 0.4821 | ambiguous | -1.232 | Destabilizing | 0.978 | D | 0.739 | prob.delet. | D | 0.531210132 | None | None | N |
E/H | 0.69 | likely_pathogenic | 0.677 | pathogenic | -0.504 | Destabilizing | 0.996 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/I | 0.7733 | likely_pathogenic | 0.7908 | pathogenic | 0.144 | Stabilizing | 0.992 | D | 0.773 | deleterious | None | None | None | None | N |
E/K | 0.3041 | likely_benign | 0.2424 | benign | -0.425 | Destabilizing | 0.865 | D | 0.524 | neutral | N | 0.448488372 | None | None | N |
E/L | 0.7959 | likely_pathogenic | 0.7914 | pathogenic | 0.144 | Stabilizing | 0.983 | D | 0.775 | deleterious | None | None | None | None | N |
E/M | 0.7956 | likely_pathogenic | 0.8116 | pathogenic | 0.573 | Stabilizing | 0.998 | D | 0.755 | deleterious | None | None | None | None | N |
E/N | 0.4837 | ambiguous | 0.5123 | ambiguous | -0.97 | Destabilizing | 0.983 | D | 0.706 | prob.neutral | None | None | None | None | N |
E/P | 0.9626 | likely_pathogenic | 0.955 | pathogenic | -0.17 | Destabilizing | 0.992 | D | 0.801 | deleterious | None | None | None | None | N |
E/Q | 0.2458 | likely_benign | 0.232 | benign | -0.834 | Destabilizing | 0.284 | N | 0.235 | neutral | N | 0.450883314 | None | None | N |
E/R | 0.4483 | ambiguous | 0.3741 | ambiguous | -0.162 | Destabilizing | 0.968 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/S | 0.3996 | ambiguous | 0.4175 | ambiguous | -1.276 | Destabilizing | 0.895 | D | 0.606 | neutral | None | None | None | None | N |
E/T | 0.4918 | ambiguous | 0.5102 | ambiguous | -0.961 | Destabilizing | 0.983 | D | 0.784 | deleterious | None | None | None | None | N |
E/V | 0.5807 | likely_pathogenic | 0.6011 | pathogenic | -0.17 | Destabilizing | 0.978 | D | 0.777 | deleterious | N | 0.483091997 | None | None | N |
E/W | 0.9738 | likely_pathogenic | 0.9761 | pathogenic | 0.021 | Stabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
E/Y | 0.8674 | likely_pathogenic | 0.8615 | pathogenic | 0.009 | Stabilizing | 0.992 | D | 0.776 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.