Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15395 | 46408;46409;46410 | chr2:178620338;178620337;178620336 | chr2:179485065;179485064;179485063 |
N2AB | 13754 | 41485;41486;41487 | chr2:178620338;178620337;178620336 | chr2:179485065;179485064;179485063 |
N2A | 12827 | 38704;38705;38706 | chr2:178620338;178620337;178620336 | chr2:179485065;179485064;179485063 |
N2B | 6330 | 19213;19214;19215 | chr2:178620338;178620337;178620336 | chr2:179485065;179485064;179485063 |
Novex-1 | 6455 | 19588;19589;19590 | chr2:178620338;178620337;178620336 | chr2:179485065;179485064;179485063 |
Novex-2 | 6522 | 19789;19790;19791 | chr2:178620338;178620337;178620336 | chr2:179485065;179485064;179485063 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.669 | N | 0.483 | 0.208 | 0.36036328697 | gnomAD-4.0.0 | 6.91192E-07 | None | None | None | None | N | None | 3.02828E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs771991019 | -0.9 | 0.669 | N | 0.424 | 0.247 | 0.271763555656 | gnomAD-2.1.1 | 4.18E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.62E-05 | None | 0 | None | 0 | 0 | 0 |
E/K | rs771991019 | -0.9 | 0.669 | N | 0.424 | 0.247 | 0.271763555656 | gnomAD-4.0.0 | 4.1461E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 7.60109E-05 | None | 0 | 0 | 0 | 2.38624E-05 | 1.67532E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1612 | likely_benign | 0.2089 | benign | -0.789 | Destabilizing | 0.022 | N | 0.195 | neutral | N | 0.431875973 | None | None | N |
E/C | 0.8236 | likely_pathogenic | 0.8907 | pathogenic | -0.406 | Destabilizing | 0.998 | D | 0.568 | neutral | None | None | None | None | N |
E/D | 0.1937 | likely_benign | 0.2782 | benign | -0.758 | Destabilizing | 0.801 | D | 0.409 | neutral | N | 0.501573347 | None | None | N |
E/F | 0.7795 | likely_pathogenic | 0.8387 | pathogenic | -0.396 | Destabilizing | 0.974 | D | 0.594 | neutral | None | None | None | None | N |
E/G | 0.2129 | likely_benign | 0.2661 | benign | -1.083 | Destabilizing | 0.669 | D | 0.483 | neutral | N | 0.489136921 | None | None | N |
E/H | 0.3964 | ambiguous | 0.5063 | ambiguous | -0.475 | Destabilizing | 0.974 | D | 0.469 | neutral | None | None | None | None | N |
E/I | 0.4735 | ambiguous | 0.5668 | pathogenic | -0.01 | Destabilizing | 0.728 | D | 0.551 | neutral | None | None | None | None | N |
E/K | 0.1461 | likely_benign | 0.1818 | benign | -0.468 | Destabilizing | 0.669 | D | 0.424 | neutral | N | 0.394942615 | None | None | N |
E/L | 0.4771 | ambiguous | 0.5636 | ambiguous | -0.01 | Destabilizing | 0.728 | D | 0.507 | neutral | None | None | None | None | N |
E/M | 0.5376 | ambiguous | 0.6243 | pathogenic | 0.298 | Stabilizing | 0.974 | D | 0.566 | neutral | None | None | None | None | N |
E/N | 0.2784 | likely_benign | 0.4149 | ambiguous | -0.789 | Destabilizing | 0.949 | D | 0.451 | neutral | None | None | None | None | N |
E/P | 0.917 | likely_pathogenic | 0.9655 | pathogenic | -0.249 | Destabilizing | 0.974 | D | 0.517 | neutral | None | None | None | None | N |
E/Q | 0.1132 | likely_benign | 0.1417 | benign | -0.706 | Destabilizing | 0.051 | N | 0.225 | neutral | N | 0.425439426 | None | None | N |
E/R | 0.2154 | likely_benign | 0.2473 | benign | -0.141 | Destabilizing | 0.728 | D | 0.435 | neutral | None | None | None | None | N |
E/S | 0.1796 | likely_benign | 0.2368 | benign | -1.052 | Destabilizing | 0.525 | D | 0.391 | neutral | None | None | None | None | N |
E/T | 0.203 | likely_benign | 0.2765 | benign | -0.82 | Destabilizing | 0.842 | D | 0.459 | neutral | None | None | None | None | N |
E/V | 0.2932 | likely_benign | 0.3591 | ambiguous | -0.249 | Destabilizing | 0.051 | N | 0.309 | neutral | N | 0.445187935 | None | None | N |
E/W | 0.9115 | likely_pathogenic | 0.9432 | pathogenic | -0.167 | Destabilizing | 0.998 | D | 0.594 | neutral | None | None | None | None | N |
E/Y | 0.6798 | likely_pathogenic | 0.754 | pathogenic | -0.168 | Destabilizing | 0.991 | D | 0.581 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.