Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15403 | 46432;46433;46434 | chr2:178620314;178620313;178620312 | chr2:179485041;179485040;179485039 |
N2AB | 13762 | 41509;41510;41511 | chr2:178620314;178620313;178620312 | chr2:179485041;179485040;179485039 |
N2A | 12835 | 38728;38729;38730 | chr2:178620314;178620313;178620312 | chr2:179485041;179485040;179485039 |
N2B | 6338 | 19237;19238;19239 | chr2:178620314;178620313;178620312 | chr2:179485041;179485040;179485039 |
Novex-1 | 6463 | 19612;19613;19614 | chr2:178620314;178620313;178620312 | chr2:179485041;179485040;179485039 |
Novex-2 | 6530 | 19813;19814;19815 | chr2:178620314;178620313;178620312 | chr2:179485041;179485040;179485039 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | None | None | 0.969 | N | 0.542 | 0.259 | 0.464098490096 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1382 | likely_benign | 0.1249 | benign | -0.302 | Destabilizing | 0.863 | D | 0.516 | neutral | N | 0.487936459 | None | None | N |
T/C | 0.6394 | likely_pathogenic | 0.6481 | pathogenic | -0.238 | Destabilizing | 0.999 | D | 0.549 | neutral | None | None | None | None | N |
T/D | 0.6858 | likely_pathogenic | 0.6697 | pathogenic | 0.074 | Stabilizing | 0.998 | D | 0.531 | neutral | None | None | None | None | N |
T/E | 0.4755 | ambiguous | 0.4615 | ambiguous | -0.007 | Destabilizing | 0.998 | D | 0.51 | neutral | None | None | None | None | N |
T/F | 0.4808 | ambiguous | 0.4711 | ambiguous | -0.803 | Destabilizing | 0.986 | D | 0.665 | neutral | None | None | None | None | N |
T/G | 0.4598 | ambiguous | 0.45 | ambiguous | -0.423 | Destabilizing | 0.998 | D | 0.597 | neutral | None | None | None | None | N |
T/H | 0.4893 | ambiguous | 0.4877 | ambiguous | -0.667 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | N |
T/I | 0.2827 | likely_benign | 0.2718 | benign | -0.105 | Destabilizing | 0.1 | N | 0.362 | neutral | N | 0.501193392 | None | None | N |
T/K | 0.2628 | likely_benign | 0.2547 | benign | -0.383 | Destabilizing | 0.993 | D | 0.521 | neutral | None | None | None | None | N |
T/L | 0.1521 | likely_benign | 0.1431 | benign | -0.105 | Destabilizing | 0.807 | D | 0.512 | neutral | None | None | None | None | N |
T/M | 0.1264 | likely_benign | 0.1166 | benign | None | Stabilizing | 0.986 | D | 0.528 | neutral | None | None | None | None | N |
T/N | 0.2405 | likely_benign | 0.2276 | benign | -0.123 | Destabilizing | 0.997 | D | 0.494 | neutral | N | 0.508584623 | None | None | N |
T/P | 0.325 | likely_benign | 0.2494 | benign | -0.142 | Destabilizing | 0.997 | D | 0.514 | neutral | N | 0.511684454 | None | None | N |
T/Q | 0.3169 | likely_benign | 0.3112 | benign | -0.356 | Destabilizing | 0.998 | D | 0.528 | neutral | None | None | None | None | N |
T/R | 0.2238 | likely_benign | 0.2217 | benign | -0.072 | Destabilizing | 0.998 | D | 0.514 | neutral | None | None | None | None | N |
T/S | 0.2162 | likely_benign | 0.1981 | benign | -0.311 | Destabilizing | 0.969 | D | 0.542 | neutral | N | 0.497373669 | None | None | N |
T/V | 0.2037 | likely_benign | 0.2034 | benign | -0.142 | Destabilizing | 0.214 | N | 0.351 | neutral | None | None | None | None | N |
T/W | 0.8114 | likely_pathogenic | 0.8041 | pathogenic | -0.833 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
T/Y | 0.573 | likely_pathogenic | 0.5679 | pathogenic | -0.548 | Destabilizing | 0.998 | D | 0.672 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.