Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15417 | 46474;46475;46476 | chr2:178620272;178620271;178620270 | chr2:179484999;179484998;179484997 |
N2AB | 13776 | 41551;41552;41553 | chr2:178620272;178620271;178620270 | chr2:179484999;179484998;179484997 |
N2A | 12849 | 38770;38771;38772 | chr2:178620272;178620271;178620270 | chr2:179484999;179484998;179484997 |
N2B | 6352 | 19279;19280;19281 | chr2:178620272;178620271;178620270 | chr2:179484999;179484998;179484997 |
Novex-1 | 6477 | 19654;19655;19656 | chr2:178620272;178620271;178620270 | chr2:179484999;179484998;179484997 |
Novex-2 | 6544 | 19855;19856;19857 | chr2:178620272;178620271;178620270 | chr2:179484999;179484998;179484997 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs993637686 | None | 0.999 | D | 0.539 | 0.478 | 0.378148810121 | gnomAD-4.0.0 | 1.79013E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.77847E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2405 | likely_benign | 0.3519 | ambiguous | -0.187 | Destabilizing | 0.999 | D | 0.75 | deleterious | D | 0.541449988 | None | None | N |
E/C | 0.9421 | likely_pathogenic | 0.9731 | pathogenic | 0.182 | Stabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
E/D | 0.161 | likely_benign | 0.2084 | benign | -0.156 | Destabilizing | 0.999 | D | 0.539 | neutral | D | 0.529888348 | None | None | N |
E/F | 0.9076 | likely_pathogenic | 0.9577 | pathogenic | -0.205 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/G | 0.1896 | likely_benign | 0.2947 | benign | -0.349 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | D | 0.548742835 | None | None | N |
E/H | 0.7071 | likely_pathogenic | 0.8216 | pathogenic | 0.002 | Stabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
E/I | 0.6196 | likely_pathogenic | 0.7698 | pathogenic | 0.19 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
E/K | 0.2644 | likely_benign | 0.3778 | ambiguous | 0.585 | Stabilizing | 0.999 | D | 0.723 | prob.delet. | D | 0.547203503 | None | None | N |
E/L | 0.6149 | likely_pathogenic | 0.7464 | pathogenic | 0.19 | Stabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
E/M | 0.7004 | likely_pathogenic | 0.8294 | pathogenic | 0.286 | Stabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
E/N | 0.3741 | ambiguous | 0.5518 | ambiguous | 0.341 | Stabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
E/P | 0.3817 | ambiguous | 0.5032 | ambiguous | 0.084 | Stabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
E/Q | 0.2244 | likely_benign | 0.306 | benign | 0.363 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | D | 0.605247753 | None | None | N |
E/R | 0.4268 | ambiguous | 0.5525 | ambiguous | 0.654 | Stabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
E/S | 0.301 | likely_benign | 0.4489 | ambiguous | 0.194 | Stabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
E/T | 0.3964 | ambiguous | 0.5709 | pathogenic | 0.331 | Stabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
E/V | 0.3975 | ambiguous | 0.5472 | ambiguous | 0.084 | Stabilizing | 1.0 | D | 0.757 | deleterious | D | 0.572668207 | None | None | N |
E/W | 0.9582 | likely_pathogenic | 0.9778 | pathogenic | -0.116 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
E/Y | 0.8256 | likely_pathogenic | 0.9092 | pathogenic | 0.033 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.