Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15420 | 46483;46484;46485 | chr2:178620263;178620262;178620261 | chr2:179484990;179484989;179484988 |
N2AB | 13779 | 41560;41561;41562 | chr2:178620263;178620262;178620261 | chr2:179484990;179484989;179484988 |
N2A | 12852 | 38779;38780;38781 | chr2:178620263;178620262;178620261 | chr2:179484990;179484989;179484988 |
N2B | 6355 | 19288;19289;19290 | chr2:178620263;178620262;178620261 | chr2:179484990;179484989;179484988 |
Novex-1 | 6480 | 19663;19664;19665 | chr2:178620263;178620262;178620261 | chr2:179484990;179484989;179484988 |
Novex-2 | 6547 | 19864;19865;19866 | chr2:178620263;178620262;178620261 | chr2:179484990;179484989;179484988 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs2058069795 | None | None | N | 0.087 | 0.111 | 0.202086224978 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.57E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/D | rs2058069795 | None | None | N | 0.087 | 0.111 | 0.202086224978 | gnomAD-4.0.0 | 2.82719E-06 | None | None | None | None | N | None | 0 | 4.24737E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/S | None | None | 0.003 | N | 0.139 | 0.094 | 0.143124449307 | gnomAD-4.0.0 | 2.15934E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.56397E-05 | None | 0 | 0 | 1.85211E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.14 | likely_benign | 0.1626 | benign | -0.114 | Destabilizing | 0.001 | N | 0.199 | neutral | None | None | None | None | N |
N/C | 0.336 | likely_benign | 0.3934 | ambiguous | 0.353 | Stabilizing | 0.942 | D | 0.311 | neutral | None | None | None | None | N |
N/D | 0.1339 | likely_benign | 0.1401 | benign | 0.117 | Stabilizing | None | N | 0.087 | neutral | N | 0.403669189 | None | None | N |
N/E | 0.2728 | likely_benign | 0.3202 | benign | 0.075 | Stabilizing | 0.004 | N | 0.128 | neutral | None | None | None | None | N |
N/F | 0.4329 | ambiguous | 0.5082 | ambiguous | -0.577 | Destabilizing | 0.428 | N | 0.441 | neutral | None | None | None | None | N |
N/G | 0.2312 | likely_benign | 0.272 | benign | -0.256 | Destabilizing | 0.063 | N | 0.179 | neutral | None | None | None | None | N |
N/H | 0.1299 | likely_benign | 0.1275 | benign | -0.324 | Destabilizing | 0.924 | D | 0.303 | neutral | N | 0.469703158 | None | None | N |
N/I | 0.1488 | likely_benign | 0.179 | benign | 0.171 | Stabilizing | 0.002 | N | 0.307 | neutral | N | 0.496047201 | None | None | N |
N/K | 0.2487 | likely_benign | 0.2711 | benign | 0.1 | Stabilizing | 0.189 | N | 0.216 | neutral | N | 0.424672255 | None | None | N |
N/L | 0.1744 | likely_benign | 0.2034 | benign | 0.171 | Stabilizing | 0.001 | N | 0.28 | neutral | None | None | None | None | N |
N/M | 0.2471 | likely_benign | 0.2896 | benign | 0.244 | Stabilizing | 0.724 | D | 0.328 | neutral | None | None | None | None | N |
N/P | 0.288 | likely_benign | 0.3433 | ambiguous | 0.101 | Stabilizing | 0.603 | D | 0.4 | neutral | None | None | None | None | N |
N/Q | 0.2563 | likely_benign | 0.2873 | benign | -0.13 | Destabilizing | 0.428 | N | 0.245 | neutral | None | None | None | None | N |
N/R | 0.2911 | likely_benign | 0.3072 | benign | 0.124 | Stabilizing | 0.428 | N | 0.247 | neutral | None | None | None | None | N |
N/S | 0.0801 | likely_benign | 0.0794 | benign | 0.069 | Stabilizing | 0.003 | N | 0.139 | neutral | N | 0.450847904 | None | None | N |
N/T | 0.0944 | likely_benign | 0.1042 | benign | 0.147 | Stabilizing | 0.104 | N | 0.199 | neutral | N | 0.443179505 | None | None | N |
N/V | 0.1522 | likely_benign | 0.1749 | benign | 0.101 | Stabilizing | 0.023 | N | 0.265 | neutral | None | None | None | None | N |
N/W | 0.7191 | likely_pathogenic | 0.7734 | pathogenic | -0.675 | Destabilizing | 0.984 | D | 0.325 | neutral | None | None | None | None | N |
N/Y | 0.1972 | likely_benign | 0.2146 | benign | -0.37 | Destabilizing | 0.801 | D | 0.409 | neutral | N | 0.504725402 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.