Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15421 | 46486;46487;46488 | chr2:178620260;178620259;178620258 | chr2:179484987;179484986;179484985 |
N2AB | 13780 | 41563;41564;41565 | chr2:178620260;178620259;178620258 | chr2:179484987;179484986;179484985 |
N2A | 12853 | 38782;38783;38784 | chr2:178620260;178620259;178620258 | chr2:179484987;179484986;179484985 |
N2B | 6356 | 19291;19292;19293 | chr2:178620260;178620259;178620258 | chr2:179484987;179484986;179484985 |
Novex-1 | 6481 | 19666;19667;19668 | chr2:178620260;178620259;178620258 | chr2:179484987;179484986;179484985 |
Novex-2 | 6548 | 19867;19868;19869 | chr2:178620260;178620259;178620258 | chr2:179484987;179484986;179484985 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1182471718 | -0.636 | 0.248 | N | 0.329 | 0.227 | 0.636377056752 | gnomAD-2.1.1 | 5.26E-06 | None | None | None | None | N | None | 0 | 4.18E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/I | rs1182471718 | -0.636 | 0.248 | N | 0.329 | 0.227 | 0.636377056752 | gnomAD-4.0.0 | 1.79914E-06 | None | None | None | None | N | None | 0 | 3.12656E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4652 | ambiguous | 0.6169 | pathogenic | -1.555 | Destabilizing | 0.122 | N | 0.321 | neutral | D | 0.614253997 | None | None | N |
V/C | 0.8909 | likely_pathogenic | 0.9397 | pathogenic | -0.685 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
V/D | 0.9705 | likely_pathogenic | 0.9821 | pathogenic | -1.621 | Destabilizing | 0.996 | D | 0.849 | deleterious | None | None | None | None | N |
V/E | 0.9373 | likely_pathogenic | 0.9616 | pathogenic | -1.581 | Destabilizing | 0.994 | D | 0.833 | deleterious | D | 0.746610291 | None | None | N |
V/F | 0.7117 | likely_pathogenic | 0.8091 | pathogenic | -1.171 | Destabilizing | 0.996 | D | 0.757 | deleterious | None | None | None | None | N |
V/G | 0.7148 | likely_pathogenic | 0.8035 | pathogenic | -1.892 | Destabilizing | 0.961 | D | 0.812 | deleterious | D | 0.569956707 | None | None | N |
V/H | 0.9816 | likely_pathogenic | 0.9899 | pathogenic | -1.492 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
V/I | 0.1076 | likely_benign | 0.1271 | benign | -0.697 | Destabilizing | 0.248 | N | 0.329 | neutral | N | 0.50686041 | None | None | N |
V/K | 0.9516 | likely_pathogenic | 0.9694 | pathogenic | -1.227 | Destabilizing | 0.996 | D | 0.834 | deleterious | None | None | None | None | N |
V/L | 0.5849 | likely_pathogenic | 0.7345 | pathogenic | -0.697 | Destabilizing | 0.835 | D | 0.617 | neutral | D | 0.606437769 | None | None | N |
V/M | 0.5406 | ambiguous | 0.6766 | pathogenic | -0.443 | Destabilizing | 0.996 | D | 0.679 | prob.neutral | None | None | None | None | N |
V/N | 0.924 | likely_pathogenic | 0.9601 | pathogenic | -0.976 | Destabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | N |
V/P | 0.7759 | likely_pathogenic | 0.8886 | pathogenic | -0.952 | Destabilizing | 0.996 | D | 0.847 | deleterious | None | None | None | None | N |
V/Q | 0.9338 | likely_pathogenic | 0.9588 | pathogenic | -1.103 | Destabilizing | 0.999 | D | 0.844 | deleterious | None | None | None | None | N |
V/R | 0.9388 | likely_pathogenic | 0.9557 | pathogenic | -0.776 | Destabilizing | 0.996 | D | 0.845 | deleterious | None | None | None | None | N |
V/S | 0.7237 | likely_pathogenic | 0.8263 | pathogenic | -1.421 | Destabilizing | 0.942 | D | 0.814 | deleterious | None | None | None | None | N |
V/T | 0.5053 | ambiguous | 0.6599 | pathogenic | -1.275 | Destabilizing | 0.97 | D | 0.66 | neutral | None | None | None | None | N |
V/W | 0.9889 | likely_pathogenic | 0.994 | pathogenic | -1.43 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
V/Y | 0.9621 | likely_pathogenic | 0.9782 | pathogenic | -1.128 | Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.