Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15426 | 46501;46502;46503 | chr2:178620245;178620244;178620243 | chr2:179484972;179484971;179484970 |
N2AB | 13785 | 41578;41579;41580 | chr2:178620245;178620244;178620243 | chr2:179484972;179484971;179484970 |
N2A | 12858 | 38797;38798;38799 | chr2:178620245;178620244;178620243 | chr2:179484972;179484971;179484970 |
N2B | 6361 | 19306;19307;19308 | chr2:178620245;178620244;178620243 | chr2:179484972;179484971;179484970 |
Novex-1 | 6486 | 19681;19682;19683 | chr2:178620245;178620244;178620243 | chr2:179484972;179484971;179484970 |
Novex-2 | 6553 | 19882;19883;19884 | chr2:178620245;178620244;178620243 | chr2:179484972;179484971;179484970 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/Y | rs763751237 | -0.604 | 0.963 | D | 0.468 | 0.61 | 0.709004203348 | gnomAD-2.1.1 | 1.06E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.19E-05 | 0 |
N/Y | rs763751237 | -0.604 | 0.963 | D | 0.468 | 0.61 | 0.709004203348 | gnomAD-4.0.0 | 5.76349E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.40997E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.6484 | likely_pathogenic | 0.6731 | pathogenic | -0.559 | Destabilizing | 0.447 | N | 0.439 | neutral | None | None | None | None | N |
N/C | 0.6649 | likely_pathogenic | 0.6705 | pathogenic | 0.257 | Stabilizing | 0.992 | D | 0.489 | neutral | None | None | None | None | N |
N/D | 0.2427 | likely_benign | 0.2759 | benign | 0.121 | Stabilizing | 0.002 | N | 0.149 | neutral | N | 0.505806137 | None | None | N |
N/E | 0.7759 | likely_pathogenic | 0.785 | pathogenic | 0.137 | Stabilizing | 0.447 | N | 0.393 | neutral | None | None | None | None | N |
N/F | 0.8995 | likely_pathogenic | 0.9243 | pathogenic | -0.665 | Destabilizing | 0.92 | D | 0.478 | neutral | None | None | None | None | N |
N/G | 0.4591 | ambiguous | 0.466 | ambiguous | -0.807 | Destabilizing | 0.25 | N | 0.387 | neutral | None | None | None | None | N |
N/H | 0.3537 | ambiguous | 0.3578 | ambiguous | -0.733 | Destabilizing | 0.963 | D | 0.447 | neutral | D | 0.732593773 | None | None | N |
N/I | 0.8974 | likely_pathogenic | 0.9243 | pathogenic | 0.025 | Stabilizing | 0.681 | D | 0.485 | neutral | D | 0.732317958 | None | None | N |
N/K | 0.7702 | likely_pathogenic | 0.7645 | pathogenic | -0.056 | Destabilizing | 0.549 | D | 0.397 | neutral | D | 0.588093169 | None | None | N |
N/L | 0.7447 | likely_pathogenic | 0.7794 | pathogenic | 0.025 | Stabilizing | 0.447 | N | 0.447 | neutral | None | None | None | None | N |
N/M | 0.8044 | likely_pathogenic | 0.8378 | pathogenic | 0.346 | Stabilizing | 0.977 | D | 0.463 | neutral | None | None | None | None | N |
N/P | 0.9887 | likely_pathogenic | 0.9909 | pathogenic | -0.141 | Destabilizing | 0.92 | D | 0.457 | neutral | None | None | None | None | N |
N/Q | 0.6899 | likely_pathogenic | 0.6803 | pathogenic | -0.465 | Destabilizing | 0.92 | D | 0.413 | neutral | None | None | None | None | N |
N/R | 0.7625 | likely_pathogenic | 0.757 | pathogenic | -0.069 | Destabilizing | 0.85 | D | 0.397 | neutral | None | None | None | None | N |
N/S | 0.1945 | likely_benign | 0.2062 | benign | -0.382 | Destabilizing | 0.016 | N | 0.194 | neutral | D | 0.647419644 | None | None | N |
N/T | 0.6771 | likely_pathogenic | 0.7499 | pathogenic | -0.196 | Destabilizing | 0.004 | N | 0.225 | neutral | D | 0.733428974 | None | None | N |
N/V | 0.871 | likely_pathogenic | 0.9053 | pathogenic | -0.141 | Destabilizing | 0.739 | D | 0.429 | neutral | None | None | None | None | N |
N/W | 0.9485 | likely_pathogenic | 0.9558 | pathogenic | -0.554 | Destabilizing | 0.992 | D | 0.567 | neutral | None | None | None | None | N |
N/Y | 0.464 | ambiguous | 0.5065 | ambiguous | -0.332 | Destabilizing | 0.963 | D | 0.468 | neutral | D | 0.695494244 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.