Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15436 | 46531;46532;46533 | chr2:178620111;178620110;178620109 | chr2:179484838;179484837;179484836 |
N2AB | 13795 | 41608;41609;41610 | chr2:178620111;178620110;178620109 | chr2:179484838;179484837;179484836 |
N2A | 12868 | 38827;38828;38829 | chr2:178620111;178620110;178620109 | chr2:179484838;179484837;179484836 |
N2B | 6371 | 19336;19337;19338 | chr2:178620111;178620110;178620109 | chr2:179484838;179484837;179484836 |
Novex-1 | 6496 | 19711;19712;19713 | chr2:178620111;178620110;178620109 | chr2:179484838;179484837;179484836 |
Novex-2 | 6563 | 19912;19913;19914 | chr2:178620111;178620110;178620109 | chr2:179484838;179484837;179484836 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | D | 0.793 | 0.696 | 0.603487413129 | gnomAD-4.0.0 | 1.60326E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.46417E-05 | 0 |
Y/H | rs748548136 | -1.625 | 1.0 | D | 0.734 | 0.556 | 0.441844919209 | gnomAD-2.1.1 | 4.09E-06 | None | None | None | None | N | None | 6.5E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Y/H | rs748548136 | -1.625 | 1.0 | D | 0.734 | 0.556 | 0.441844919209 | gnomAD-3.1.2 | 1.98E-05 | None | None | None | None | N | None | 4.83E-05 | 6.57E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/H | rs748548136 | -1.625 | 1.0 | D | 0.734 | 0.556 | 0.441844919209 | gnomAD-4.0.0 | 5.59456E-06 | None | None | None | None | N | None | 1.07173E-04 | 1.68731E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/N | rs748548136 | -2.744 | 1.0 | D | 0.825 | 0.673 | 0.718952573792 | gnomAD-2.1.1 | 4.09E-06 | None | None | None | None | N | None | 0 | 2.96E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Y/N | rs748548136 | -2.744 | 1.0 | D | 0.825 | 0.673 | 0.718952573792 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.57E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/N | rs748548136 | -2.744 | 1.0 | D | 0.825 | 0.673 | 0.718952573792 | gnomAD-4.0.0 | 3.10809E-06 | None | None | None | None | N | None | 0 | 5.06192E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.21213E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9684 | likely_pathogenic | 0.9773 | pathogenic | -2.77 | Highly Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
Y/C | 0.6438 | likely_pathogenic | 0.6539 | pathogenic | -1.944 | Destabilizing | 1.0 | D | 0.793 | deleterious | D | 0.679615735 | None | None | N |
Y/D | 0.9628 | likely_pathogenic | 0.9788 | pathogenic | -3.124 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | D | 0.718300733 | None | None | N |
Y/E | 0.9801 | likely_pathogenic | 0.9869 | pathogenic | -2.901 | Highly Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
Y/F | 0.2009 | likely_benign | 0.2339 | benign | -0.956 | Destabilizing | 0.999 | D | 0.521 | neutral | N | 0.504783193 | None | None | N |
Y/G | 0.9518 | likely_pathogenic | 0.9581 | pathogenic | -3.21 | Highly Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
Y/H | 0.6748 | likely_pathogenic | 0.7317 | pathogenic | -1.943 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | D | 0.535731519 | None | None | N |
Y/I | 0.8564 | likely_pathogenic | 0.8811 | pathogenic | -1.322 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
Y/K | 0.9861 | likely_pathogenic | 0.9891 | pathogenic | -2.39 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
Y/L | 0.8199 | likely_pathogenic | 0.852 | pathogenic | -1.322 | Destabilizing | 0.999 | D | 0.655 | neutral | None | None | None | None | N |
Y/M | 0.8939 | likely_pathogenic | 0.9229 | pathogenic | -1.177 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
Y/N | 0.7633 | likely_pathogenic | 0.8451 | pathogenic | -3.272 | Highly Destabilizing | 1.0 | D | 0.825 | deleterious | D | 0.717943892 | None | None | N |
Y/P | 0.9953 | likely_pathogenic | 0.9967 | pathogenic | -1.818 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
Y/Q | 0.9647 | likely_pathogenic | 0.978 | pathogenic | -2.914 | Highly Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
Y/R | 0.9626 | likely_pathogenic | 0.9723 | pathogenic | -2.322 | Highly Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
Y/S | 0.9192 | likely_pathogenic | 0.946 | pathogenic | -3.634 | Highly Destabilizing | 1.0 | D | 0.795 | deleterious | D | 0.655130454 | None | None | N |
Y/T | 0.9487 | likely_pathogenic | 0.9667 | pathogenic | -3.278 | Highly Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
Y/V | 0.7841 | likely_pathogenic | 0.8202 | pathogenic | -1.818 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
Y/W | 0.6717 | likely_pathogenic | 0.7371 | pathogenic | -0.317 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.