Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15437 | 46534;46535;46536 | chr2:178620108;178620107;178620106 | chr2:179484835;179484834;179484833 |
N2AB | 13796 | 41611;41612;41613 | chr2:178620108;178620107;178620106 | chr2:179484835;179484834;179484833 |
N2A | 12869 | 38830;38831;38832 | chr2:178620108;178620107;178620106 | chr2:179484835;179484834;179484833 |
N2B | 6372 | 19339;19340;19341 | chr2:178620108;178620107;178620106 | chr2:179484835;179484834;179484833 |
Novex-1 | 6497 | 19714;19715;19716 | chr2:178620108;178620107;178620106 | chr2:179484835;179484834;179484833 |
Novex-2 | 6564 | 19915;19916;19917 | chr2:178620108;178620107;178620106 | chr2:179484835;179484834;179484833 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs552087956 | -1.017 | 0.001 | N | 0.152 | 0.186 | 0.227260227426 | gnomAD-2.1.1 | 4.1E-06 | None | None | None | None | N | None | 6.5E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/T | rs552087956 | -1.017 | 0.001 | N | 0.152 | 0.186 | 0.227260227426 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/T | rs552087956 | -1.017 | 0.001 | N | 0.152 | 0.186 | 0.227260227426 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
K/T | rs552087956 | -1.017 | 0.001 | N | 0.152 | 0.186 | 0.227260227426 | gnomAD-4.0.0 | 6.57895E-06 | None | None | None | None | N | None | 2.40801E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3364 | likely_benign | 0.3019 | benign | -0.732 | Destabilizing | None | N | 0.155 | neutral | None | None | None | None | N |
K/C | 0.6085 | likely_pathogenic | 0.5947 | pathogenic | -0.809 | Destabilizing | 0.883 | D | 0.399 | neutral | None | None | None | None | N |
K/D | 0.6538 | likely_pathogenic | 0.6116 | pathogenic | -0.056 | Destabilizing | 0.22 | N | 0.324 | neutral | None | None | None | None | N |
K/E | 0.2487 | likely_benign | 0.1996 | benign | 0.107 | Stabilizing | 0.042 | N | 0.259 | neutral | N | 0.467748443 | None | None | N |
K/F | 0.7216 | likely_pathogenic | 0.6811 | pathogenic | -0.231 | Destabilizing | 0.497 | N | 0.431 | neutral | None | None | None | None | N |
K/G | 0.5563 | ambiguous | 0.5359 | ambiguous | -1.133 | Destabilizing | 0.124 | N | 0.383 | neutral | None | None | None | None | N |
K/H | 0.2226 | likely_benign | 0.1897 | benign | -1.211 | Destabilizing | 0.667 | D | 0.387 | neutral | None | None | None | None | N |
K/I | 0.2482 | likely_benign | 0.2127 | benign | 0.327 | Stabilizing | 0.001 | N | 0.303 | neutral | N | 0.500615051 | None | None | N |
K/L | 0.2926 | likely_benign | 0.2678 | benign | 0.327 | Stabilizing | 0.02 | N | 0.329 | neutral | None | None | None | None | N |
K/M | 0.2709 | likely_benign | 0.2161 | benign | 0.009 | Stabilizing | 0.497 | N | 0.389 | neutral | None | None | None | None | N |
K/N | 0.4109 | ambiguous | 0.3817 | ambiguous | -0.66 | Destabilizing | 0.175 | N | 0.275 | neutral | N | 0.510349703 | None | None | N |
K/P | 0.9516 | likely_pathogenic | 0.9586 | pathogenic | 0.003 | Stabilizing | 0.364 | N | 0.397 | neutral | None | None | None | None | N |
K/Q | 0.1164 | likely_benign | 0.0992 | benign | -0.606 | Destabilizing | 0.003 | N | 0.111 | neutral | N | 0.440517793 | None | None | N |
K/R | 0.0927 | likely_benign | 0.0774 | benign | -0.552 | Destabilizing | 0.096 | N | 0.237 | neutral | N | 0.501573347 | None | None | N |
K/S | 0.3698 | ambiguous | 0.3354 | benign | -1.37 | Destabilizing | 0.055 | N | 0.261 | neutral | None | None | None | None | N |
K/T | 0.1396 | likely_benign | 0.1118 | benign | -0.977 | Destabilizing | 0.001 | N | 0.152 | neutral | N | 0.488550706 | None | None | N |
K/V | 0.2515 | likely_benign | 0.2122 | benign | 0.003 | Stabilizing | 0.02 | N | 0.347 | neutral | None | None | None | None | N |
K/W | 0.7649 | likely_pathogenic | 0.7247 | pathogenic | -0.097 | Destabilizing | 0.958 | D | 0.429 | neutral | None | None | None | None | N |
K/Y | 0.6014 | likely_pathogenic | 0.5551 | ambiguous | 0.178 | Stabilizing | 0.667 | D | 0.407 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.