Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15448 | 46567;46568;46569 | chr2:178620075;178620074;178620073 | chr2:179484802;179484801;179484800 |
N2AB | 13807 | 41644;41645;41646 | chr2:178620075;178620074;178620073 | chr2:179484802;179484801;179484800 |
N2A | 12880 | 38863;38864;38865 | chr2:178620075;178620074;178620073 | chr2:179484802;179484801;179484800 |
N2B | 6383 | 19372;19373;19374 | chr2:178620075;178620074;178620073 | chr2:179484802;179484801;179484800 |
Novex-1 | 6508 | 19747;19748;19749 | chr2:178620075;178620074;178620073 | chr2:179484802;179484801;179484800 |
Novex-2 | 6575 | 19948;19949;19950 | chr2:178620075;178620074;178620073 | chr2:179484802;179484801;179484800 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | None | None | 0.91 | N | 0.467 | 0.194 | 0.596036732933 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5265 | ambiguous | 0.6065 | pathogenic | -2.687 | Highly Destabilizing | 0.97 | D | 0.651 | neutral | None | None | None | None | N |
I/C | 0.7381 | likely_pathogenic | 0.7752 | pathogenic | -1.822 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | N |
I/D | 0.8716 | likely_pathogenic | 0.8982 | pathogenic | -2.942 | Highly Destabilizing | 0.996 | D | 0.749 | deleterious | None | None | None | None | N |
I/E | 0.6511 | likely_pathogenic | 0.6947 | pathogenic | -2.774 | Highly Destabilizing | 0.991 | D | 0.72 | prob.delet. | None | None | None | None | N |
I/F | 0.1871 | likely_benign | 0.2244 | benign | -1.627 | Destabilizing | 0.998 | D | 0.6 | neutral | N | 0.511314617 | None | None | N |
I/G | 0.8491 | likely_pathogenic | 0.8823 | pathogenic | -3.171 | Highly Destabilizing | 0.996 | D | 0.715 | prob.delet. | None | None | None | None | N |
I/H | 0.4278 | ambiguous | 0.4693 | ambiguous | -2.518 | Highly Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
I/K | 0.4569 | ambiguous | 0.459 | ambiguous | -2.267 | Highly Destabilizing | 0.942 | D | 0.685 | prob.neutral | None | None | None | None | N |
I/L | 0.1563 | likely_benign | 0.1831 | benign | -1.304 | Destabilizing | 0.91 | D | 0.467 | neutral | N | 0.503201079 | None | None | N |
I/M | 0.1372 | likely_benign | 0.1606 | benign | -1.094 | Destabilizing | 0.998 | D | 0.601 | neutral | D | 0.552922718 | None | None | N |
I/N | 0.363 | ambiguous | 0.4194 | ambiguous | -2.422 | Highly Destabilizing | 0.994 | D | 0.749 | deleterious | N | 0.508426278 | None | None | N |
I/P | 0.9909 | likely_pathogenic | 0.9905 | pathogenic | -1.745 | Destabilizing | 0.999 | D | 0.754 | deleterious | None | None | None | None | N |
I/Q | 0.4707 | ambiguous | 0.5147 | ambiguous | -2.389 | Highly Destabilizing | 0.991 | D | 0.743 | deleterious | None | None | None | None | N |
I/R | 0.3598 | ambiguous | 0.3627 | ambiguous | -1.755 | Destabilizing | 0.092 | N | 0.526 | neutral | None | None | None | None | N |
I/S | 0.4229 | ambiguous | 0.4934 | ambiguous | -3.068 | Highly Destabilizing | 0.994 | D | 0.686 | prob.neutral | N | 0.504722144 | None | None | N |
I/T | 0.22 | likely_benign | 0.2444 | benign | -2.78 | Highly Destabilizing | 0.98 | D | 0.621 | neutral | N | 0.481201794 | None | None | N |
I/V | 0.0897 | likely_benign | 0.091 | benign | -1.745 | Destabilizing | 0.954 | D | 0.489 | neutral | N | 0.446202445 | None | None | N |
I/W | 0.7521 | likely_pathogenic | 0.7802 | pathogenic | -1.99 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
I/Y | 0.4794 | ambiguous | 0.5322 | ambiguous | -1.764 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.