Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15490 | 46693;46694;46695 | chr2:178619849;178619848;178619847 | chr2:179484576;179484575;179484574 |
N2AB | 13849 | 41770;41771;41772 | chr2:178619849;178619848;178619847 | chr2:179484576;179484575;179484574 |
N2A | 12922 | 38989;38990;38991 | chr2:178619849;178619848;178619847 | chr2:179484576;179484575;179484574 |
N2B | 6425 | 19498;19499;19500 | chr2:178619849;178619848;178619847 | chr2:179484576;179484575;179484574 |
Novex-1 | 6550 | 19873;19874;19875 | chr2:178619849;178619848;178619847 | chr2:179484576;179484575;179484574 |
Novex-2 | 6617 | 20074;20075;20076 | chr2:178619849;178619848;178619847 | chr2:179484576;179484575;179484574 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.669 | N | 0.336 | 0.158 | 0.366466682447 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1911 | likely_benign | 0.2125 | benign | -0.815 | Destabilizing | 0.842 | D | 0.298 | neutral | None | None | None | None | N |
L/C | 0.3562 | ambiguous | 0.4259 | ambiguous | -0.69 | Destabilizing | 0.998 | D | 0.431 | neutral | None | None | None | None | N |
L/D | 0.5585 | ambiguous | 0.6357 | pathogenic | -0.304 | Destabilizing | 0.991 | D | 0.473 | neutral | None | None | None | None | N |
L/E | 0.2667 | likely_benign | 0.2958 | benign | -0.376 | Destabilizing | 0.974 | D | 0.456 | neutral | None | None | None | None | N |
L/F | 0.0816 | likely_benign | 0.1082 | benign | -0.662 | Destabilizing | 0.005 | N | 0.093 | neutral | N | 0.34787272 | None | None | N |
L/G | 0.4744 | ambiguous | 0.5399 | ambiguous | -1.019 | Destabilizing | 0.974 | D | 0.421 | neutral | None | None | None | None | N |
L/H | 0.1309 | likely_benign | 0.1762 | benign | -0.244 | Destabilizing | 0.934 | D | 0.477 | neutral | N | 0.418439716 | None | None | N |
L/I | 0.0926 | likely_benign | 0.0975 | benign | -0.388 | Destabilizing | 0.669 | D | 0.336 | neutral | N | 0.364242044 | None | None | N |
L/K | 0.1997 | likely_benign | 0.2297 | benign | -0.525 | Destabilizing | 0.974 | D | 0.441 | neutral | None | None | None | None | N |
L/M | 0.1095 | likely_benign | 0.1166 | benign | -0.424 | Destabilizing | 0.974 | D | 0.409 | neutral | None | None | None | None | N |
L/N | 0.2794 | likely_benign | 0.3444 | ambiguous | -0.343 | Destabilizing | 0.974 | D | 0.477 | neutral | None | None | None | None | N |
L/P | 0.5716 | likely_pathogenic | 0.5585 | ambiguous | -0.497 | Destabilizing | 0.989 | D | 0.483 | neutral | N | 0.443044416 | None | None | N |
L/Q | 0.1146 | likely_benign | 0.1287 | benign | -0.559 | Destabilizing | 0.991 | D | 0.467 | neutral | None | None | None | None | N |
L/R | 0.1386 | likely_benign | 0.1567 | benign | 0.057 | Stabilizing | 0.966 | D | 0.458 | neutral | N | 0.417879788 | None | None | N |
L/S | 0.1861 | likely_benign | 0.2043 | benign | -0.829 | Destabilizing | 0.974 | D | 0.393 | neutral | None | None | None | None | N |
L/T | 0.1399 | likely_benign | 0.1466 | benign | -0.79 | Destabilizing | 0.974 | D | 0.341 | neutral | None | None | None | None | N |
L/V | 0.0847 | likely_benign | 0.0863 | benign | -0.497 | Destabilizing | 0.801 | D | 0.349 | neutral | N | 0.401207479 | None | None | N |
L/W | 0.1543 | likely_benign | 0.2012 | benign | -0.68 | Destabilizing | 0.993 | D | 0.452 | neutral | None | None | None | None | N |
L/Y | 0.1586 | likely_benign | 0.2395 | benign | -0.444 | Destabilizing | 0.016 | N | 0.22 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.