Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15501 | 46726;46727;46728 | chr2:178619816;178619815;178619814 | chr2:179484543;179484542;179484541 |
N2AB | 13860 | 41803;41804;41805 | chr2:178619816;178619815;178619814 | chr2:179484543;179484542;179484541 |
N2A | 12933 | 39022;39023;39024 | chr2:178619816;178619815;178619814 | chr2:179484543;179484542;179484541 |
N2B | 6436 | 19531;19532;19533 | chr2:178619816;178619815;178619814 | chr2:179484543;179484542;179484541 |
Novex-1 | 6561 | 19906;19907;19908 | chr2:178619816;178619815;178619814 | chr2:179484543;179484542;179484541 |
Novex-2 | 6628 | 20107;20108;20109 | chr2:178619816;178619815;178619814 | chr2:179484543;179484542;179484541 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.992 | D | 0.669 | 0.585 | 0.594113984522 | gnomAD-4.0.0 | 1.59457E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86454E-06 | 0 | 0 |
A/V | None | None | 0.619 | N | 0.413 | 0.392 | 0.526995340713 | gnomAD-4.0.0 | 1.59458E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86456E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4933 | ambiguous | 0.5709 | pathogenic | -0.916 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
A/D | 0.9966 | likely_pathogenic | 0.9954 | pathogenic | -2.658 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
A/E | 0.9921 | likely_pathogenic | 0.9885 | pathogenic | -2.358 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | D | 0.547365735 | None | None | N |
A/F | 0.9645 | likely_pathogenic | 0.9576 | pathogenic | -0.574 | Destabilizing | 0.999 | D | 0.887 | deleterious | None | None | None | None | N |
A/G | 0.4091 | ambiguous | 0.4237 | ambiguous | -1.65 | Destabilizing | 0.999 | D | 0.635 | neutral | D | 0.525290617 | None | None | N |
A/H | 0.9951 | likely_pathogenic | 0.9928 | pathogenic | -2.269 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
A/I | 0.7161 | likely_pathogenic | 0.7841 | pathogenic | 0.421 | Stabilizing | 0.988 | D | 0.742 | deleterious | None | None | None | None | N |
A/K | 0.9981 | likely_pathogenic | 0.9976 | pathogenic | -1.07 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
A/L | 0.664 | likely_pathogenic | 0.7145 | pathogenic | 0.421 | Stabilizing | 0.988 | D | 0.707 | prob.neutral | None | None | None | None | N |
A/M | 0.7985 | likely_pathogenic | 0.8229 | pathogenic | -0.005 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
A/N | 0.9863 | likely_pathogenic | 0.9837 | pathogenic | -1.701 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
A/P | 0.9893 | likely_pathogenic | 0.988 | pathogenic | -0.052 | Destabilizing | 1.0 | D | 0.843 | deleterious | D | 0.547365735 | None | None | N |
A/Q | 0.9847 | likely_pathogenic | 0.9798 | pathogenic | -1.301 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
A/R | 0.993 | likely_pathogenic | 0.9905 | pathogenic | -1.475 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
A/S | 0.4072 | ambiguous | 0.3699 | ambiguous | -2.005 | Highly Destabilizing | 0.996 | D | 0.651 | neutral | D | 0.547806922 | None | None | N |
A/T | 0.4405 | ambiguous | 0.4142 | ambiguous | -1.566 | Destabilizing | 0.992 | D | 0.669 | neutral | D | 0.54828533 | None | None | N |
A/V | 0.3037 | likely_benign | 0.3405 | ambiguous | -0.052 | Destabilizing | 0.619 | D | 0.413 | neutral | N | 0.475870635 | None | None | N |
A/W | 0.9974 | likely_pathogenic | 0.9966 | pathogenic | -1.474 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
A/Y | 0.9898 | likely_pathogenic | 0.985 | pathogenic | -0.912 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.