Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15510 | 46753;46754;46755 | chr2:178619789;178619788;178619787 | chr2:179484516;179484515;179484514 |
N2AB | 13869 | 41830;41831;41832 | chr2:178619789;178619788;178619787 | chr2:179484516;179484515;179484514 |
N2A | 12942 | 39049;39050;39051 | chr2:178619789;178619788;178619787 | chr2:179484516;179484515;179484514 |
N2B | 6445 | 19558;19559;19560 | chr2:178619789;178619788;178619787 | chr2:179484516;179484515;179484514 |
Novex-1 | 6570 | 19933;19934;19935 | chr2:178619789;178619788;178619787 | chr2:179484516;179484515;179484514 |
Novex-2 | 6637 | 20134;20135;20136 | chr2:178619789;178619788;178619787 | chr2:179484516;179484515;179484514 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs754751783 | -0.295 | 0.997 | D | 0.565 | 0.552 | 0.643851019634 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
V/L | rs754751783 | -0.295 | 0.997 | D | 0.565 | 0.552 | 0.643851019634 | gnomAD-4.0.0 | 3.18814E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72816E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4888 | ambiguous | 0.5945 | pathogenic | -1.795 | Destabilizing | 0.999 | D | 0.557 | neutral | D | 0.546790984 | None | None | N |
V/C | 0.8327 | likely_pathogenic | 0.9268 | pathogenic | -1.044 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
V/D | 0.9778 | likely_pathogenic | 0.9743 | pathogenic | -2.214 | Highly Destabilizing | 1.0 | D | 0.85 | deleterious | D | 0.62519196 | None | None | N |
V/E | 0.9602 | likely_pathogenic | 0.9454 | pathogenic | -2.082 | Highly Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
V/F | 0.7476 | likely_pathogenic | 0.753 | pathogenic | -1.199 | Destabilizing | 1.0 | D | 0.825 | deleterious | D | 0.626695103 | None | None | N |
V/G | 0.6263 | likely_pathogenic | 0.7064 | pathogenic | -2.204 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | D | 0.547783201 | None | None | N |
V/H | 0.9843 | likely_pathogenic | 0.9831 | pathogenic | -1.74 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
V/I | 0.1524 | likely_benign | 0.1707 | benign | -0.695 | Destabilizing | 0.997 | D | 0.506 | neutral | N | 0.509109617 | None | None | N |
V/K | 0.9612 | likely_pathogenic | 0.9446 | pathogenic | -1.485 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
V/L | 0.7542 | likely_pathogenic | 0.778 | pathogenic | -0.695 | Destabilizing | 0.997 | D | 0.565 | neutral | D | 0.547392255 | None | None | N |
V/M | 0.6366 | likely_pathogenic | 0.6723 | pathogenic | -0.563 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
V/N | 0.9163 | likely_pathogenic | 0.9197 | pathogenic | -1.525 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
V/P | 0.8853 | likely_pathogenic | 0.8448 | pathogenic | -1.034 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
V/Q | 0.9578 | likely_pathogenic | 0.9489 | pathogenic | -1.551 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
V/R | 0.9523 | likely_pathogenic | 0.9368 | pathogenic | -1.122 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
V/S | 0.7589 | likely_pathogenic | 0.8035 | pathogenic | -2.021 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
V/T | 0.4739 | ambiguous | 0.5498 | ambiguous | -1.77 | Destabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | N |
V/W | 0.9905 | likely_pathogenic | 0.9932 | pathogenic | -1.549 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
V/Y | 0.9581 | likely_pathogenic | 0.9606 | pathogenic | -1.187 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.