Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15541 | 46846;46847;46848 | chr2:178619696;178619695;178619694 | chr2:179484423;179484422;179484421 |
N2AB | 13900 | 41923;41924;41925 | chr2:178619696;178619695;178619694 | chr2:179484423;179484422;179484421 |
N2A | 12973 | 39142;39143;39144 | chr2:178619696;178619695;178619694 | chr2:179484423;179484422;179484421 |
N2B | 6476 | 19651;19652;19653 | chr2:178619696;178619695;178619694 | chr2:179484423;179484422;179484421 |
Novex-1 | 6601 | 20026;20027;20028 | chr2:178619696;178619695;178619694 | chr2:179484423;179484422;179484421 |
Novex-2 | 6668 | 20227;20228;20229 | chr2:178619696;178619695;178619694 | chr2:179484423;179484422;179484421 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs2057981019 | None | 0.998 | N | 0.676 | 0.38 | 0.501559347837 | gnomAD-3.1.2 | 6.59E-06 | None | None | None | None | N | None | 0 | 6.58E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/M | rs2057981019 | None | 0.998 | N | 0.676 | 0.38 | 0.501559347837 | gnomAD-4.0.0 | 6.58536E-06 | None | None | None | None | N | None | 0 | 6.57549E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8092 | likely_pathogenic | 0.7322 | pathogenic | -2.814 | Highly Destabilizing | 0.992 | D | 0.592 | neutral | None | None | None | None | N |
I/C | 0.8774 | likely_pathogenic | 0.8479 | pathogenic | -2.457 | Highly Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
I/D | 0.9944 | likely_pathogenic | 0.9922 | pathogenic | -3.625 | Highly Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
I/E | 0.9859 | likely_pathogenic | 0.9804 | pathogenic | -3.432 | Highly Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
I/F | 0.7379 | likely_pathogenic | 0.7295 | pathogenic | -1.638 | Destabilizing | 0.998 | D | 0.701 | prob.neutral | N | 0.51718186 | None | None | N |
I/G | 0.9708 | likely_pathogenic | 0.9557 | pathogenic | -3.315 | Highly Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
I/H | 0.9814 | likely_pathogenic | 0.9792 | pathogenic | -2.692 | Highly Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
I/K | 0.9588 | likely_pathogenic | 0.9548 | pathogenic | -2.293 | Highly Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
I/L | 0.2838 | likely_benign | 0.2843 | benign | -1.36 | Destabilizing | 0.889 | D | 0.393 | neutral | N | 0.492364449 | None | None | N |
I/M | 0.291 | likely_benign | 0.2757 | benign | -1.485 | Destabilizing | 0.998 | D | 0.676 | prob.neutral | N | 0.520162475 | None | None | N |
I/N | 0.8996 | likely_pathogenic | 0.8789 | pathogenic | -2.673 | Highly Destabilizing | 0.999 | D | 0.791 | deleterious | N | 0.518135557 | None | None | N |
I/P | 0.955 | likely_pathogenic | 0.9487 | pathogenic | -1.828 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
I/Q | 0.9695 | likely_pathogenic | 0.9616 | pathogenic | -2.581 | Highly Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
I/R | 0.9405 | likely_pathogenic | 0.9329 | pathogenic | -1.886 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
I/S | 0.8613 | likely_pathogenic | 0.8128 | pathogenic | -3.276 | Highly Destabilizing | 0.998 | D | 0.744 | deleterious | N | 0.509496402 | None | None | N |
I/T | 0.6528 | likely_pathogenic | 0.6073 | pathogenic | -2.952 | Highly Destabilizing | 0.989 | D | 0.707 | prob.neutral | N | 0.505917299 | None | None | N |
I/V | 0.1233 | likely_benign | 0.1293 | benign | -1.828 | Destabilizing | 0.333 | N | 0.265 | neutral | N | 0.414587069 | None | None | N |
I/W | 0.9883 | likely_pathogenic | 0.9871 | pathogenic | -2.058 | Highly Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
I/Y | 0.9641 | likely_pathogenic | 0.9608 | pathogenic | -1.867 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.