Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15561 | 46906;46907;46908 | chr2:178619636;178619635;178619634 | chr2:179484363;179484362;179484361 |
N2AB | 13920 | 41983;41984;41985 | chr2:178619636;178619635;178619634 | chr2:179484363;179484362;179484361 |
N2A | 12993 | 39202;39203;39204 | chr2:178619636;178619635;178619634 | chr2:179484363;179484362;179484361 |
N2B | 6496 | 19711;19712;19713 | chr2:178619636;178619635;178619634 | chr2:179484363;179484362;179484361 |
Novex-1 | 6621 | 20086;20087;20088 | chr2:178619636;178619635;178619634 | chr2:179484363;179484362;179484361 |
Novex-2 | 6688 | 20287;20288;20289 | chr2:178619636;178619635;178619634 | chr2:179484363;179484362;179484361 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 1.0 | N | 0.702 | 0.244 | 0.258283824007 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6877 | likely_pathogenic | 0.6643 | pathogenic | -0.557 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | I |
K/C | 0.8408 | likely_pathogenic | 0.806 | pathogenic | -0.568 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | I |
K/D | 0.9128 | likely_pathogenic | 0.8896 | pathogenic | -0.129 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | I |
K/E | 0.5401 | ambiguous | 0.522 | ambiguous | -0.028 | Destabilizing | 0.999 | D | 0.589 | neutral | N | 0.501925779 | None | None | I |
K/F | 0.8688 | likely_pathogenic | 0.8332 | pathogenic | -0.24 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
K/G | 0.8552 | likely_pathogenic | 0.833 | pathogenic | -0.92 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
K/H | 0.4438 | ambiguous | 0.4033 | ambiguous | -1.251 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
K/I | 0.5057 | ambiguous | 0.4585 | ambiguous | 0.38 | Stabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | I |
K/L | 0.5623 | ambiguous | 0.5318 | ambiguous | 0.38 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
K/M | 0.427 | ambiguous | 0.3867 | ambiguous | 0.263 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | D | 0.547558535 | None | None | I |
K/N | 0.7286 | likely_pathogenic | 0.682 | pathogenic | -0.428 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | N | 0.499416171 | None | None | I |
K/P | 0.9656 | likely_pathogenic | 0.9579 | pathogenic | 0.098 | Stabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
K/Q | 0.277 | likely_benign | 0.2736 | benign | -0.521 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | N | 0.50880408 | None | None | I |
K/R | 0.0996 | likely_benign | 0.0995 | benign | -0.626 | Destabilizing | 0.999 | D | 0.536 | neutral | N | 0.50107029 | None | None | I |
K/S | 0.7434 | likely_pathogenic | 0.7154 | pathogenic | -1.088 | Destabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | I |
K/T | 0.3523 | ambiguous | 0.3217 | benign | -0.783 | Destabilizing | 1.0 | D | 0.743 | deleterious | N | 0.505749117 | None | None | I |
K/V | 0.4429 | ambiguous | 0.4197 | ambiguous | 0.098 | Stabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
K/W | 0.8694 | likely_pathogenic | 0.8516 | pathogenic | -0.103 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
K/Y | 0.7922 | likely_pathogenic | 0.7583 | pathogenic | 0.176 | Stabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.