Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15578 | 46957;46958;46959 | chr2:178618818;178618817;178618816 | chr2:179483545;179483544;179483543 |
N2AB | 13937 | 42034;42035;42036 | chr2:178618818;178618817;178618816 | chr2:179483545;179483544;179483543 |
N2A | 13010 | 39253;39254;39255 | chr2:178618818;178618817;178618816 | chr2:179483545;179483544;179483543 |
N2B | 6513 | 19762;19763;19764 | chr2:178618818;178618817;178618816 | chr2:179483545;179483544;179483543 |
Novex-1 | 6638 | 20137;20138;20139 | chr2:178618818;178618817;178618816 | chr2:179483545;179483544;179483543 |
Novex-2 | 6705 | 20338;20339;20340 | chr2:178618818;178618817;178618816 | chr2:179483545;179483544;179483543 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.999 | N | 0.496 | 0.431 | 0.656528602549 | gnomAD-4.0.0 | 1.59845E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86668E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2441 | likely_benign | 0.2945 | benign | -1.05 | Destabilizing | 0.999 | D | 0.496 | neutral | N | 0.508103218 | None | None | N |
V/C | 0.792 | likely_pathogenic | 0.839 | pathogenic | -0.841 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
V/D | 0.478 | ambiguous | 0.5097 | ambiguous | -0.785 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
V/E | 0.3499 | ambiguous | 0.3694 | ambiguous | -0.783 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | N | 0.502448275 | None | None | N |
V/F | 0.2412 | likely_benign | 0.2846 | benign | -0.718 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
V/G | 0.4273 | ambiguous | 0.4797 | ambiguous | -1.342 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | N | 0.512048216 | None | None | N |
V/H | 0.6818 | likely_pathogenic | 0.7299 | pathogenic | -0.765 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
V/I | 0.0809 | likely_benign | 0.0927 | benign | -0.363 | Destabilizing | 0.998 | D | 0.473 | neutral | None | None | None | None | N |
V/K | 0.5697 | likely_pathogenic | 0.6064 | pathogenic | -0.999 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
V/L | 0.2441 | likely_benign | 0.3016 | benign | -0.363 | Destabilizing | 0.997 | D | 0.486 | neutral | N | 0.51184647 | None | None | N |
V/M | 0.1978 | likely_benign | 0.2625 | benign | -0.445 | Destabilizing | 1.0 | D | 0.617 | neutral | N | 0.517110808 | None | None | N |
V/N | 0.3831 | ambiguous | 0.4393 | ambiguous | -0.854 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
V/P | 0.7526 | likely_pathogenic | 0.8095 | pathogenic | -0.557 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
V/Q | 0.4562 | ambiguous | 0.4773 | ambiguous | -0.967 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/R | 0.5354 | ambiguous | 0.5538 | ambiguous | -0.522 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
V/S | 0.2907 | likely_benign | 0.3315 | benign | -1.341 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
V/T | 0.1761 | likely_benign | 0.2021 | benign | -1.221 | Destabilizing | 0.999 | D | 0.607 | neutral | None | None | None | None | N |
V/W | 0.8445 | likely_pathogenic | 0.8881 | pathogenic | -0.898 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
V/Y | 0.6202 | likely_pathogenic | 0.685 | pathogenic | -0.597 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.