Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15595 | 47008;47009;47010 | chr2:178618767;178618766;178618765 | chr2:179483494;179483493;179483492 |
N2AB | 13954 | 42085;42086;42087 | chr2:178618767;178618766;178618765 | chr2:179483494;179483493;179483492 |
N2A | 13027 | 39304;39305;39306 | chr2:178618767;178618766;178618765 | chr2:179483494;179483493;179483492 |
N2B | 6530 | 19813;19814;19815 | chr2:178618767;178618766;178618765 | chr2:179483494;179483493;179483492 |
Novex-1 | 6655 | 20188;20189;20190 | chr2:178618767;178618766;178618765 | chr2:179483494;179483493;179483492 |
Novex-2 | 6722 | 20389;20390;20391 | chr2:178618767;178618766;178618765 | chr2:179483494;179483493;179483492 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | None | None | 1.0 | D | 0.817 | 0.635 | 0.622259118589 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
P/S | None | None | 1.0 | D | 0.781 | 0.621 | 0.543647257999 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.8475 | likely_pathogenic | 0.9023 | pathogenic | -1.158 | Destabilizing | 1.0 | D | 0.747 | deleterious | D | 0.562488489 | None | None | I |
P/C | 0.9836 | likely_pathogenic | 0.9925 | pathogenic | -0.478 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | I |
P/D | 0.9765 | likely_pathogenic | 0.9853 | pathogenic | -1.154 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | I |
P/E | 0.9356 | likely_pathogenic | 0.9513 | pathogenic | -1.195 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
P/F | 0.9906 | likely_pathogenic | 0.9949 | pathogenic | -1.063 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
P/G | 0.9291 | likely_pathogenic | 0.9459 | pathogenic | -1.405 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
P/H | 0.953 | likely_pathogenic | 0.9758 | pathogenic | -1.071 | Destabilizing | 1.0 | D | 0.788 | deleterious | D | 0.579297634 | None | None | I |
P/I | 0.9508 | likely_pathogenic | 0.9698 | pathogenic | -0.597 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
P/K | 0.9612 | likely_pathogenic | 0.9726 | pathogenic | -1.004 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | I |
P/L | 0.8785 | likely_pathogenic | 0.9257 | pathogenic | -0.597 | Destabilizing | 1.0 | D | 0.791 | deleterious | D | 0.579297634 | None | None | I |
P/M | 0.9669 | likely_pathogenic | 0.9835 | pathogenic | -0.387 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | I |
P/N | 0.9749 | likely_pathogenic | 0.9821 | pathogenic | -0.633 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
P/Q | 0.9084 | likely_pathogenic | 0.9419 | pathogenic | -0.839 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
P/R | 0.9148 | likely_pathogenic | 0.9408 | pathogenic | -0.476 | Destabilizing | 1.0 | D | 0.817 | deleterious | D | 0.563121173 | None | None | I |
P/S | 0.923 | likely_pathogenic | 0.9516 | pathogenic | -0.986 | Destabilizing | 1.0 | D | 0.781 | deleterious | D | 0.561165802 | None | None | I |
P/T | 0.8593 | likely_pathogenic | 0.9105 | pathogenic | -0.933 | Destabilizing | 1.0 | D | 0.775 | deleterious | D | 0.563121173 | None | None | I |
P/V | 0.9015 | likely_pathogenic | 0.9359 | pathogenic | -0.751 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
P/W | 0.9928 | likely_pathogenic | 0.9969 | pathogenic | -1.252 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
P/Y | 0.9864 | likely_pathogenic | 0.9923 | pathogenic | -0.967 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.