Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15598 | 47017;47018;47019 | chr2:178618758;178618757;178618756 | chr2:179483485;179483484;179483483 |
N2AB | 13957 | 42094;42095;42096 | chr2:178618758;178618757;178618756 | chr2:179483485;179483484;179483483 |
N2A | 13030 | 39313;39314;39315 | chr2:178618758;178618757;178618756 | chr2:179483485;179483484;179483483 |
N2B | 6533 | 19822;19823;19824 | chr2:178618758;178618757;178618756 | chr2:179483485;179483484;179483483 |
Novex-1 | 6658 | 20197;20198;20199 | chr2:178618758;178618757;178618756 | chr2:179483485;179483484;179483483 |
Novex-2 | 6725 | 20398;20399;20400 | chr2:178618758;178618757;178618756 | chr2:179483485;179483484;179483483 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs371987003 | None | 0.996 | N | 0.485 | 0.166 | 0.440810947182 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.95E-05 | 0 | 0 |
E/D | rs371987003 | None | 0.996 | N | 0.485 | 0.166 | 0.440810947182 | gnomAD-4.0.0 | 9.92776E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.35733E-05 | 0 | 0 |
E/K | None | None | 0.992 | N | 0.541 | 0.335 | 0.429435026966 | gnomAD-4.0.0 | 1.59583E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43419E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1189 | likely_benign | 0.1373 | benign | -0.401 | Destabilizing | 0.996 | D | 0.633 | neutral | N | 0.509584452 | None | None | N |
E/C | 0.7601 | likely_pathogenic | 0.8258 | pathogenic | -0.106 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
E/D | 0.1159 | likely_benign | 0.1456 | benign | -0.457 | Destabilizing | 0.996 | D | 0.485 | neutral | N | 0.508507846 | None | None | N |
E/F | 0.5489 | ambiguous | 0.6118 | pathogenic | -0.314 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/G | 0.1664 | likely_benign | 0.1908 | benign | -0.628 | Destabilizing | 0.999 | D | 0.696 | prob.neutral | N | 0.51288252 | None | None | N |
E/H | 0.305 | likely_benign | 0.3727 | ambiguous | -0.32 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/I | 0.2011 | likely_benign | 0.2398 | benign | 0.171 | Stabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
E/K | 0.0925 | likely_benign | 0.1063 | benign | -0.052 | Destabilizing | 0.992 | D | 0.541 | neutral | N | 0.506955764 | None | None | N |
E/L | 0.2627 | likely_benign | 0.3222 | benign | 0.171 | Stabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
E/M | 0.3161 | likely_benign | 0.3781 | ambiguous | 0.313 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
E/N | 0.1586 | likely_benign | 0.1959 | benign | -0.187 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
E/P | 0.699 | likely_pathogenic | 0.708 | pathogenic | 0.001 | Stabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
E/Q | 0.1083 | likely_benign | 0.1261 | benign | -0.15 | Destabilizing | 0.957 | D | 0.295 | neutral | N | 0.51275641 | None | None | N |
E/R | 0.1748 | likely_benign | 0.1999 | benign | 0.145 | Stabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/S | 0.1384 | likely_benign | 0.1617 | benign | -0.408 | Destabilizing | 0.997 | D | 0.619 | neutral | None | None | None | None | N |
E/T | 0.1276 | likely_benign | 0.1406 | benign | -0.239 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
E/V | 0.128 | likely_benign | 0.1512 | benign | 0.001 | Stabilizing | 0.999 | D | 0.775 | deleterious | N | 0.51597344 | None | None | N |
E/W | 0.7898 | likely_pathogenic | 0.8459 | pathogenic | -0.208 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
E/Y | 0.4736 | ambiguous | 0.565 | pathogenic | -0.101 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.