Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15604 | 47035;47036;47037 | chr2:178618740;178618739;178618738 | chr2:179483467;179483466;179483465 |
N2AB | 13963 | 42112;42113;42114 | chr2:178618740;178618739;178618738 | chr2:179483467;179483466;179483465 |
N2A | 13036 | 39331;39332;39333 | chr2:178618740;178618739;178618738 | chr2:179483467;179483466;179483465 |
N2B | 6539 | 19840;19841;19842 | chr2:178618740;178618739;178618738 | chr2:179483467;179483466;179483465 |
Novex-1 | 6664 | 20215;20216;20217 | chr2:178618740;178618739;178618738 | chr2:179483467;179483466;179483465 |
Novex-2 | 6731 | 20416;20417;20418 | chr2:178618740;178618739;178618738 | chr2:179483467;179483466;179483465 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs749463044 | 0.552 | 0.024 | N | 0.264 | 0.144 | 0.18995819373 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/K | rs749463044 | 0.552 | 0.024 | N | 0.264 | 0.144 | 0.18995819373 | gnomAD-4.0.0 | 1.36996E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.32051E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1549 | likely_benign | 0.2207 | benign | -0.273 | Destabilizing | None | N | 0.173 | neutral | N | 0.449539738 | None | None | N |
E/C | 0.7283 | likely_pathogenic | 0.8345 | pathogenic | 0.056 | Stabilizing | 0.676 | D | 0.407 | neutral | None | None | None | None | N |
E/D | 0.0691 | likely_benign | 0.088 | benign | -0.264 | Destabilizing | None | N | 0.107 | neutral | N | 0.387082963 | None | None | N |
E/F | 0.6733 | likely_pathogenic | 0.7774 | pathogenic | -0.22 | Destabilizing | 0.356 | N | 0.434 | neutral | None | None | None | None | N |
E/G | 0.0734 | likely_benign | 0.0924 | benign | -0.464 | Destabilizing | None | N | 0.17 | neutral | N | 0.422594015 | None | None | N |
E/H | 0.4431 | ambiguous | 0.5856 | pathogenic | -0.039 | Destabilizing | 0.356 | N | 0.275 | neutral | None | None | None | None | N |
E/I | 0.4447 | ambiguous | 0.6056 | pathogenic | 0.192 | Stabilizing | 0.214 | N | 0.466 | neutral | None | None | None | None | N |
E/K | 0.1974 | likely_benign | 0.2668 | benign | 0.387 | Stabilizing | 0.024 | N | 0.264 | neutral | N | 0.447515716 | None | None | N |
E/L | 0.3731 | ambiguous | 0.5364 | ambiguous | 0.192 | Stabilizing | 0.038 | N | 0.504 | neutral | None | None | None | None | N |
E/M | 0.452 | ambiguous | 0.6015 | pathogenic | 0.273 | Stabilizing | 0.628 | D | 0.407 | neutral | None | None | None | None | N |
E/N | 0.1347 | likely_benign | 0.1693 | benign | 0.137 | Stabilizing | None | N | 0.123 | neutral | None | None | None | None | N |
E/P | 0.7167 | likely_pathogenic | 0.8084 | pathogenic | 0.057 | Stabilizing | 0.136 | N | 0.467 | neutral | None | None | None | None | N |
E/Q | 0.1589 | likely_benign | 0.2104 | benign | 0.168 | Stabilizing | 0.055 | N | 0.28 | neutral | N | 0.449729255 | None | None | N |
E/R | 0.283 | likely_benign | 0.3509 | ambiguous | 0.536 | Stabilizing | 0.072 | N | 0.246 | neutral | None | None | None | None | N |
E/S | 0.1714 | likely_benign | 0.2346 | benign | -0.032 | Destabilizing | 0.016 | N | 0.215 | neutral | None | None | None | None | N |
E/T | 0.2684 | likely_benign | 0.3963 | ambiguous | 0.122 | Stabilizing | 0.031 | N | 0.391 | neutral | None | None | None | None | N |
E/V | 0.2834 | likely_benign | 0.4206 | ambiguous | 0.057 | Stabilizing | 0.029 | N | 0.488 | neutral | N | 0.451400123 | None | None | N |
E/W | 0.7961 | likely_pathogenic | 0.8803 | pathogenic | -0.107 | Destabilizing | 0.864 | D | 0.427 | neutral | None | None | None | None | N |
E/Y | 0.4831 | ambiguous | 0.6097 | pathogenic | 0.017 | Stabilizing | 0.628 | D | 0.423 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.