Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15605 | 47038;47039;47040 | chr2:178618737;178618736;178618735 | chr2:179483464;179483463;179483462 |
N2AB | 13964 | 42115;42116;42117 | chr2:178618737;178618736;178618735 | chr2:179483464;179483463;179483462 |
N2A | 13037 | 39334;39335;39336 | chr2:178618737;178618736;178618735 | chr2:179483464;179483463;179483462 |
N2B | 6540 | 19843;19844;19845 | chr2:178618737;178618736;178618735 | chr2:179483464;179483463;179483462 |
Novex-1 | 6665 | 20218;20219;20220 | chr2:178618737;178618736;178618735 | chr2:179483464;179483463;179483462 |
Novex-2 | 6732 | 20419;20420;20421 | chr2:178618737;178618736;178618735 | chr2:179483464;179483463;179483462 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs777985762 | 0.42 | 0.669 | N | 0.279 | 0.107 | 0.110078149338 | gnomAD-2.1.1 | 8.1E-06 | None | None | None | None | N | None | 6.48E-05 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
N/K | rs777985762 | 0.42 | 0.669 | N | 0.279 | 0.107 | 0.110078149338 | gnomAD-3.1.2 | 6.59E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/K | rs777985762 | 0.42 | 0.669 | N | 0.279 | 0.107 | 0.110078149338 | gnomAD-4.0.0 | 1.8613E-06 | None | None | None | None | N | None | 1.33736E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.09864E-05 | 1.60416E-05 |
N/S | None | None | 0.136 | N | 0.135 | 0.067 | 0.104622674875 | gnomAD-4.0.0 | 3.19062E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.79096E-05 | None | 0 | 0 | 0 | 1.43402E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1316 | likely_benign | 0.2254 | benign | -0.239 | Destabilizing | 0.525 | D | 0.301 | neutral | None | None | None | None | N |
N/C | 0.2891 | likely_benign | 0.4983 | ambiguous | 0.278 | Stabilizing | 0.998 | D | 0.339 | neutral | None | None | None | None | N |
N/D | 0.0677 | likely_benign | 0.0959 | benign | 0.276 | Stabilizing | 0.005 | N | 0.105 | neutral | N | 0.400183728 | None | None | N |
N/E | 0.1422 | likely_benign | 0.2336 | benign | 0.258 | Stabilizing | 0.016 | N | 0.136 | neutral | None | None | None | None | N |
N/F | 0.4086 | ambiguous | 0.6136 | pathogenic | -0.621 | Destabilizing | 0.991 | D | 0.346 | neutral | None | None | None | None | N |
N/G | 0.1434 | likely_benign | 0.2087 | benign | -0.415 | Destabilizing | 0.007 | N | 0.102 | neutral | None | None | None | None | N |
N/H | 0.1298 | likely_benign | 0.1956 | benign | -0.405 | Destabilizing | 0.966 | D | 0.317 | neutral | N | 0.454336827 | None | None | N |
N/I | 0.195 | likely_benign | 0.3278 | benign | 0.138 | Stabilizing | 0.966 | D | 0.375 | neutral | N | 0.455836331 | None | None | N |
N/K | 0.1581 | likely_benign | 0.2474 | benign | 0.112 | Stabilizing | 0.669 | D | 0.279 | neutral | N | 0.449360073 | None | None | N |
N/L | 0.214 | likely_benign | 0.3526 | ambiguous | 0.138 | Stabilizing | 0.842 | D | 0.426 | neutral | None | None | None | None | N |
N/M | 0.2191 | likely_benign | 0.3491 | ambiguous | 0.207 | Stabilizing | 0.998 | D | 0.325 | neutral | None | None | None | None | N |
N/P | 0.5252 | ambiguous | 0.7301 | pathogenic | 0.04 | Stabilizing | 0.974 | D | 0.395 | neutral | None | None | None | None | N |
N/Q | 0.182 | likely_benign | 0.2894 | benign | -0.2 | Destabilizing | 0.728 | D | 0.331 | neutral | None | None | None | None | N |
N/R | 0.2257 | likely_benign | 0.3593 | ambiguous | 0.117 | Stabilizing | 0.842 | D | 0.341 | neutral | None | None | None | None | N |
N/S | 0.0765 | likely_benign | 0.0993 | benign | -0.075 | Destabilizing | 0.136 | N | 0.135 | neutral | N | 0.449158 | None | None | N |
N/T | 0.0923 | likely_benign | 0.1391 | benign | 0.052 | Stabilizing | 0.669 | D | 0.279 | neutral | N | 0.45230286 | None | None | N |
N/V | 0.1877 | likely_benign | 0.3223 | benign | 0.04 | Stabilizing | 0.915 | D | 0.442 | neutral | None | None | None | None | N |
N/W | 0.6076 | likely_pathogenic | 0.7784 | pathogenic | -0.665 | Destabilizing | 0.998 | D | 0.451 | neutral | None | None | None | None | N |
N/Y | 0.156 | likely_benign | 0.2402 | benign | -0.37 | Destabilizing | 0.989 | D | 0.334 | neutral | N | 0.455239851 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.