Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15610 | 47053;47054;47055 | chr2:178618722;178618721;178618720 | chr2:179483449;179483448;179483447 |
N2AB | 13969 | 42130;42131;42132 | chr2:178618722;178618721;178618720 | chr2:179483449;179483448;179483447 |
N2A | 13042 | 39349;39350;39351 | chr2:178618722;178618721;178618720 | chr2:179483449;179483448;179483447 |
N2B | 6545 | 19858;19859;19860 | chr2:178618722;178618721;178618720 | chr2:179483449;179483448;179483447 |
Novex-1 | 6670 | 20233;20234;20235 | chr2:178618722;178618721;178618720 | chr2:179483449;179483448;179483447 |
Novex-2 | 6737 | 20434;20435;20436 | chr2:178618722;178618721;178618720 | chr2:179483449;179483448;179483447 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs748293286 | -0.067 | 0.317 | N | 0.354 | 0.121 | 0.346992582518 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.66E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0557 | likely_benign | 0.0634 | benign | -0.182 | Destabilizing | 0.027 | N | 0.235 | neutral | N | 0.484210524 | None | None | N |
T/C | 0.2166 | likely_benign | 0.2856 | benign | -0.309 | Destabilizing | 0.824 | D | 0.361 | neutral | None | None | None | None | N |
T/D | 0.1413 | likely_benign | 0.1937 | benign | 0.246 | Stabilizing | 0.001 | N | 0.211 | neutral | None | None | None | None | N |
T/E | 0.1152 | likely_benign | 0.1532 | benign | 0.159 | Stabilizing | 0.035 | N | 0.269 | neutral | None | None | None | None | N |
T/F | 0.139 | likely_benign | 0.1893 | benign | -0.818 | Destabilizing | 0.555 | D | 0.381 | neutral | None | None | None | None | N |
T/G | 0.0923 | likely_benign | 0.1118 | benign | -0.256 | Destabilizing | 0.035 | N | 0.303 | neutral | None | None | None | None | N |
T/H | 0.1264 | likely_benign | 0.1591 | benign | -0.458 | Destabilizing | 0.555 | D | 0.371 | neutral | None | None | None | None | N |
T/I | 0.1005 | likely_benign | 0.1366 | benign | -0.111 | Destabilizing | 0.317 | N | 0.354 | neutral | N | 0.486564184 | None | None | N |
T/K | 0.0902 | likely_benign | 0.1072 | benign | -0.212 | Destabilizing | 0.001 | N | 0.197 | neutral | N | 0.435107728 | None | None | N |
T/L | 0.0711 | likely_benign | 0.0829 | benign | -0.111 | Destabilizing | 0.149 | N | 0.273 | neutral | None | None | None | None | N |
T/M | 0.0808 | likely_benign | 0.096 | benign | -0.108 | Destabilizing | 0.791 | D | 0.35 | neutral | None | None | None | None | N |
T/N | 0.0706 | likely_benign | 0.0804 | benign | -0.044 | Destabilizing | 0.081 | N | 0.165 | neutral | None | None | None | None | N |
T/P | 0.0586 | likely_benign | 0.0667 | benign | -0.109 | Destabilizing | 0.117 | N | 0.345 | neutral | N | 0.484499307 | None | None | N |
T/Q | 0.0989 | likely_benign | 0.123 | benign | -0.233 | Destabilizing | 0.38 | N | 0.342 | neutral | None | None | None | None | N |
T/R | 0.089 | likely_benign | 0.1068 | benign | 0.034 | Stabilizing | 0.062 | N | 0.325 | neutral | N | 0.485538884 | None | None | N |
T/S | 0.0642 | likely_benign | 0.0729 | benign | -0.23 | Destabilizing | None | N | 0.144 | neutral | N | 0.42637871 | None | None | N |
T/V | 0.0871 | likely_benign | 0.1098 | benign | -0.109 | Destabilizing | 0.149 | N | 0.167 | neutral | None | None | None | None | N |
T/W | 0.3069 | likely_benign | 0.3848 | ambiguous | -0.892 | Destabilizing | 0.935 | D | 0.433 | neutral | None | None | None | None | N |
T/Y | 0.1433 | likely_benign | 0.1862 | benign | -0.566 | Destabilizing | 0.555 | D | 0.379 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.