Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15612 | 47059;47060;47061 | chr2:178618716;178618715;178618714 | chr2:179483443;179483442;179483441 |
N2AB | 13971 | 42136;42137;42138 | chr2:178618716;178618715;178618714 | chr2:179483443;179483442;179483441 |
N2A | 13044 | 39355;39356;39357 | chr2:178618716;178618715;178618714 | chr2:179483443;179483442;179483441 |
N2B | 6547 | 19864;19865;19866 | chr2:178618716;178618715;178618714 | chr2:179483443;179483442;179483441 |
Novex-1 | 6672 | 20239;20240;20241 | chr2:178618716;178618715;178618714 | chr2:179483443;179483442;179483441 |
Novex-2 | 6739 | 20440;20441;20442 | chr2:178618716;178618715;178618714 | chr2:179483443;179483442;179483441 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs2057779557 | None | 0.454 | N | 0.262 | 0.11 | 0.186928172975 | gnomAD-3.1.2 | 6.59E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/A | rs2057779557 | None | 0.454 | N | 0.262 | 0.11 | 0.186928172975 | gnomAD-4.0.0 | 6.58519E-06 | None | None | None | None | N | None | 2.41604E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.069 | likely_benign | 0.0768 | benign | -0.775 | Destabilizing | 0.454 | N | 0.262 | neutral | N | 0.500444872 | None | None | N |
T/C | 0.299 | likely_benign | 0.3405 | ambiguous | -0.381 | Destabilizing | 0.998 | D | 0.405 | neutral | None | None | None | None | N |
T/D | 0.1558 | likely_benign | 0.2131 | benign | 0.846 | Stabilizing | 0.728 | D | 0.332 | neutral | None | None | None | None | N |
T/E | 0.1484 | likely_benign | 0.1953 | benign | 0.853 | Stabilizing | 0.842 | D | 0.333 | neutral | None | None | None | None | N |
T/F | 0.1409 | likely_benign | 0.1786 | benign | -0.987 | Destabilizing | 0.974 | D | 0.417 | neutral | None | None | None | None | N |
T/G | 0.1364 | likely_benign | 0.1625 | benign | -1.002 | Destabilizing | 0.007 | N | 0.231 | neutral | None | None | None | None | N |
T/H | 0.1461 | likely_benign | 0.1765 | benign | -1.163 | Destabilizing | 0.037 | N | 0.236 | neutral | None | None | None | None | N |
T/I | 0.1325 | likely_benign | 0.1609 | benign | -0.268 | Destabilizing | 0.966 | D | 0.455 | neutral | N | 0.489807163 | None | None | N |
T/K | 0.1475 | likely_benign | 0.1915 | benign | -0.151 | Destabilizing | 0.842 | D | 0.347 | neutral | None | None | None | None | N |
T/L | 0.0838 | likely_benign | 0.0947 | benign | -0.268 | Destabilizing | 0.842 | D | 0.359 | neutral | None | None | None | None | N |
T/M | 0.0785 | likely_benign | 0.0864 | benign | -0.181 | Destabilizing | 0.998 | D | 0.399 | neutral | None | None | None | None | N |
T/N | 0.0622 | likely_benign | 0.0705 | benign | -0.111 | Destabilizing | 0.022 | N | 0.1 | neutral | N | 0.462995559 | None | None | N |
T/P | 0.1094 | likely_benign | 0.1208 | benign | -0.406 | Destabilizing | 0.966 | D | 0.451 | neutral | N | 0.503577223 | None | None | N |
T/Q | 0.1455 | likely_benign | 0.1708 | benign | -0.184 | Destabilizing | 0.949 | D | 0.459 | neutral | None | None | None | None | N |
T/R | 0.1353 | likely_benign | 0.1761 | benign | -0.074 | Destabilizing | 0.842 | D | 0.443 | neutral | None | None | None | None | N |
T/S | 0.0765 | likely_benign | 0.0912 | benign | -0.542 | Destabilizing | 0.136 | N | 0.123 | neutral | N | 0.477023038 | None | None | N |
T/V | 0.1131 | likely_benign | 0.1333 | benign | -0.406 | Destabilizing | 0.915 | D | 0.273 | neutral | None | None | None | None | N |
T/W | 0.3783 | ambiguous | 0.4387 | ambiguous | -0.904 | Destabilizing | 0.998 | D | 0.441 | neutral | None | None | None | None | N |
T/Y | 0.1339 | likely_benign | 0.1569 | benign | -0.632 | Destabilizing | 0.949 | D | 0.422 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.