Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15621 | 47086;47087;47088 | chr2:178618689;178618688;178618687 | chr2:179483416;179483415;179483414 |
N2AB | 13980 | 42163;42164;42165 | chr2:178618689;178618688;178618687 | chr2:179483416;179483415;179483414 |
N2A | 13053 | 39382;39383;39384 | chr2:178618689;178618688;178618687 | chr2:179483416;179483415;179483414 |
N2B | 6556 | 19891;19892;19893 | chr2:178618689;178618688;178618687 | chr2:179483416;179483415;179483414 |
Novex-1 | 6681 | 20266;20267;20268 | chr2:178618689;178618688;178618687 | chr2:179483416;179483415;179483414 |
Novex-2 | 6748 | 20467;20468;20469 | chr2:178618689;178618688;178618687 | chr2:179483416;179483415;179483414 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | None | None | 0.454 | N | 0.438 | 0.153 | 0.307648195649 | gnomAD-4.0.0 | 1.59483E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86428E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.077 | likely_benign | 0.0931 | benign | -0.816 | Destabilizing | 0.454 | N | 0.438 | neutral | N | 0.514422284 | None | None | N |
S/C | 0.1032 | likely_benign | 0.1107 | benign | -0.655 | Destabilizing | 0.997 | D | 0.526 | neutral | N | 0.517619755 | None | None | N |
S/D | 0.4504 | ambiguous | 0.5883 | pathogenic | -1.397 | Destabilizing | 0.525 | D | 0.495 | neutral | None | None | None | None | N |
S/E | 0.3985 | ambiguous | 0.4586 | ambiguous | -1.213 | Destabilizing | 0.029 | N | 0.167 | neutral | None | None | None | None | N |
S/F | 0.1684 | likely_benign | 0.2378 | benign | -0.701 | Destabilizing | 0.966 | D | 0.584 | neutral | N | 0.516443155 | None | None | N |
S/G | 0.1234 | likely_benign | 0.1692 | benign | -1.207 | Destabilizing | 0.688 | D | 0.491 | neutral | None | None | None | None | N |
S/H | 0.2667 | likely_benign | 0.2933 | benign | -1.591 | Destabilizing | 0.991 | D | 0.547 | neutral | None | None | None | None | N |
S/I | 0.1258 | likely_benign | 0.157 | benign | 0.17 | Stabilizing | 0.949 | D | 0.558 | neutral | None | None | None | None | N |
S/K | 0.4818 | ambiguous | 0.5695 | pathogenic | -0.27 | Destabilizing | 0.842 | D | 0.508 | neutral | None | None | None | None | N |
S/L | 0.1182 | likely_benign | 0.1608 | benign | 0.17 | Stabilizing | 0.728 | D | 0.519 | neutral | None | None | None | None | N |
S/M | 0.1764 | likely_benign | 0.2101 | benign | 0.067 | Stabilizing | 0.998 | D | 0.535 | neutral | None | None | None | None | N |
S/N | 0.1367 | likely_benign | 0.1798 | benign | -0.943 | Destabilizing | 0.842 | D | 0.509 | neutral | None | None | None | None | N |
S/P | 0.928 | likely_pathogenic | 0.9693 | pathogenic | -0.123 | Destabilizing | 0.966 | D | 0.536 | neutral | N | 0.51727274 | None | None | N |
S/Q | 0.3635 | ambiguous | 0.3972 | ambiguous | -0.726 | Destabilizing | 0.842 | D | 0.525 | neutral | None | None | None | None | N |
S/R | 0.383 | ambiguous | 0.4554 | ambiguous | -0.629 | Destabilizing | 0.949 | D | 0.534 | neutral | None | None | None | None | N |
S/T | 0.0618 | likely_benign | 0.0732 | benign | -0.615 | Destabilizing | 0.051 | N | 0.218 | neutral | N | 0.484291519 | None | None | N |
S/V | 0.1292 | likely_benign | 0.1562 | benign | -0.123 | Destabilizing | 0.728 | D | 0.52 | neutral | None | None | None | None | N |
S/W | 0.364 | ambiguous | 0.4299 | ambiguous | -0.948 | Destabilizing | 0.998 | D | 0.668 | neutral | None | None | None | None | N |
S/Y | 0.1709 | likely_benign | 0.2154 | benign | -0.492 | Destabilizing | 0.989 | D | 0.581 | neutral | N | 0.51727274 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.