Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15623 | 47092;47093;47094 | chr2:178618683;178618682;178618681 | chr2:179483410;179483409;179483408 |
N2AB | 13982 | 42169;42170;42171 | chr2:178618683;178618682;178618681 | chr2:179483410;179483409;179483408 |
N2A | 13055 | 39388;39389;39390 | chr2:178618683;178618682;178618681 | chr2:179483410;179483409;179483408 |
N2B | 6558 | 19897;19898;19899 | chr2:178618683;178618682;178618681 | chr2:179483410;179483409;179483408 |
Novex-1 | 6683 | 20272;20273;20274 | chr2:178618683;178618682;178618681 | chr2:179483410;179483409;179483408 |
Novex-2 | 6750 | 20473;20474;20475 | chr2:178618683;178618682;178618681 | chr2:179483410;179483409;179483408 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.939 | N | 0.616 | 0.419 | 0.423119698836 | gnomAD-4.0.0 | 1.5947E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.864E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2939 | likely_benign | 0.3877 | ambiguous | -0.526 | Destabilizing | 0.953 | D | 0.557 | neutral | None | None | None | None | N |
R/C | 0.1565 | likely_benign | 0.1885 | benign | -0.561 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | N |
R/D | 0.5324 | ambiguous | 0.6415 | pathogenic | 0.142 | Stabilizing | 0.986 | D | 0.695 | prob.neutral | None | None | None | None | N |
R/E | 0.2581 | likely_benign | 0.3459 | ambiguous | 0.259 | Stabilizing | 0.91 | D | 0.475 | neutral | None | None | None | None | N |
R/F | 0.4187 | ambiguous | 0.543 | ambiguous | -0.457 | Destabilizing | 0.998 | D | 0.675 | prob.neutral | None | None | None | None | N |
R/G | 0.2464 | likely_benign | 0.324 | benign | -0.81 | Destabilizing | 0.939 | D | 0.616 | neutral | N | 0.516834958 | None | None | N |
R/H | 0.09 | likely_benign | 0.1001 | benign | -1.137 | Destabilizing | 0.998 | D | 0.607 | neutral | None | None | None | None | N |
R/I | 0.18 | likely_benign | 0.222 | benign | 0.22 | Stabilizing | 0.991 | D | 0.695 | prob.neutral | N | 0.512649789 | None | None | N |
R/K | 0.078 | likely_benign | 0.0995 | benign | -0.446 | Destabilizing | 0.046 | N | 0.263 | neutral | N | 0.494652956 | None | None | N |
R/L | 0.1952 | likely_benign | 0.2541 | benign | 0.22 | Stabilizing | 0.953 | D | 0.616 | neutral | None | None | None | None | N |
R/M | 0.2023 | likely_benign | 0.2623 | benign | -0.211 | Destabilizing | 0.999 | D | 0.676 | prob.neutral | None | None | None | None | N |
R/N | 0.3701 | ambiguous | 0.4706 | ambiguous | -0.057 | Destabilizing | 0.986 | D | 0.593 | neutral | None | None | None | None | N |
R/P | 0.7035 | likely_pathogenic | 0.8017 | pathogenic | -0.007 | Destabilizing | 0.993 | D | 0.703 | prob.neutral | None | None | None | None | N |
R/Q | 0.0864 | likely_benign | 0.0993 | benign | -0.188 | Destabilizing | 0.986 | D | 0.596 | neutral | None | None | None | None | N |
R/S | 0.3095 | likely_benign | 0.4021 | ambiguous | -0.753 | Destabilizing | 0.939 | D | 0.635 | neutral | N | 0.514543533 | None | None | N |
R/T | 0.1377 | likely_benign | 0.1738 | benign | -0.458 | Destabilizing | 0.982 | D | 0.694 | prob.neutral | N | 0.505375636 | None | None | N |
R/V | 0.2276 | likely_benign | 0.285 | benign | -0.007 | Destabilizing | 0.993 | D | 0.695 | prob.neutral | None | None | None | None | N |
R/W | 0.1698 | likely_benign | 0.2276 | benign | -0.221 | Destabilizing | 0.999 | D | 0.613 | neutral | None | None | None | None | N |
R/Y | 0.2953 | likely_benign | 0.4062 | ambiguous | 0.108 | Stabilizing | 0.998 | D | 0.698 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.