Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15625 | 47098;47099;47100 | chr2:178618677;178618676;178618675 | chr2:179483404;179483403;179483402 |
N2AB | 13984 | 42175;42176;42177 | chr2:178618677;178618676;178618675 | chr2:179483404;179483403;179483402 |
N2A | 13057 | 39394;39395;39396 | chr2:178618677;178618676;178618675 | chr2:179483404;179483403;179483402 |
N2B | 6560 | 19903;19904;19905 | chr2:178618677;178618676;178618675 | chr2:179483404;179483403;179483402 |
Novex-1 | 6685 | 20278;20279;20280 | chr2:178618677;178618676;178618675 | chr2:179483404;179483403;179483402 |
Novex-2 | 6752 | 20479;20480;20481 | chr2:178618677;178618676;178618675 | chr2:179483404;179483403;179483402 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | None | N | 0.22 | 0.066 | 0.324161360171 | gnomAD-4.0.0 | 1.59468E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.03251E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.0795 | likely_benign | 0.0817 | benign | -0.575 | Destabilizing | 0.007 | N | 0.293 | neutral | None | None | None | None | N |
L/C | 0.2632 | likely_benign | 0.3186 | benign | -0.65 | Destabilizing | 0.356 | N | 0.375 | neutral | None | None | None | None | N |
L/D | 0.2227 | likely_benign | 0.2594 | benign | -0.305 | Destabilizing | 0.038 | N | 0.459 | neutral | None | None | None | None | N |
L/E | 0.1337 | likely_benign | 0.1516 | benign | -0.397 | Destabilizing | 0.016 | N | 0.444 | neutral | None | None | None | None | N |
L/F | 0.0688 | likely_benign | 0.0893 | benign | -0.591 | Destabilizing | 0.029 | N | 0.283 | neutral | N | 0.48601087 | None | None | N |
L/G | 0.1688 | likely_benign | 0.1892 | benign | -0.726 | Destabilizing | 0.016 | N | 0.438 | neutral | None | None | None | None | N |
L/H | 0.0963 | likely_benign | 0.1121 | benign | 0.002 | Stabilizing | 0.214 | N | 0.417 | neutral | None | None | None | None | N |
L/I | 0.0667 | likely_benign | 0.0729 | benign | -0.298 | Destabilizing | 0.012 | N | 0.221 | neutral | N | 0.48601087 | None | None | N |
L/K | 0.1099 | likely_benign | 0.1136 | benign | -0.395 | Destabilizing | None | N | 0.167 | neutral | None | None | None | None | N |
L/M | 0.0778 | likely_benign | 0.0888 | benign | -0.452 | Destabilizing | 0.356 | N | 0.318 | neutral | None | None | None | None | N |
L/N | 0.1217 | likely_benign | 0.1167 | benign | -0.201 | Destabilizing | 0.038 | N | 0.462 | neutral | None | None | None | None | N |
L/P | 0.0771 | likely_benign | 0.0845 | benign | -0.358 | Destabilizing | 0.072 | N | 0.458 | neutral | None | None | None | None | N |
L/Q | 0.0755 | likely_benign | 0.0793 | benign | -0.426 | Destabilizing | 0.072 | N | 0.444 | neutral | None | None | None | None | N |
L/R | 0.0987 | likely_benign | 0.1116 | benign | 0.17 | Stabilizing | 0.038 | N | 0.443 | neutral | None | None | None | None | N |
L/S | 0.0774 | likely_benign | 0.081 | benign | -0.612 | Destabilizing | None | N | 0.22 | neutral | N | 0.481122547 | None | None | N |
L/T | 0.0697 | likely_benign | 0.072 | benign | -0.6 | Destabilizing | None | N | 0.163 | neutral | None | None | None | None | N |
L/V | 0.0658 | likely_benign | 0.0706 | benign | -0.358 | Destabilizing | None | N | 0.129 | neutral | N | 0.46630899 | None | None | N |
L/W | 0.1242 | likely_benign | 0.1613 | benign | -0.605 | Destabilizing | 0.676 | D | 0.387 | neutral | None | None | None | None | N |
L/Y | 0.1431 | likely_benign | 0.1823 | benign | -0.368 | Destabilizing | None | N | 0.205 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.