Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15627 | 47104;47105;47106 | chr2:178618671;178618670;178618669 | chr2:179483398;179483397;179483396 |
N2AB | 13986 | 42181;42182;42183 | chr2:178618671;178618670;178618669 | chr2:179483398;179483397;179483396 |
N2A | 13059 | 39400;39401;39402 | chr2:178618671;178618670;178618669 | chr2:179483398;179483397;179483396 |
N2B | 6562 | 19909;19910;19911 | chr2:178618671;178618670;178618669 | chr2:179483398;179483397;179483396 |
Novex-1 | 6687 | 20284;20285;20286 | chr2:178618671;178618670;178618669 | chr2:179483398;179483397;179483396 |
Novex-2 | 6754 | 20485;20486;20487 | chr2:178618671;178618670;178618669 | chr2:179483398;179483397;179483396 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/D | rs115813214 | -2.53 | 0.968 | N | 0.663 | 0.61 | 0.72038618509 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
A/D | rs115813214 | -2.53 | 0.968 | N | 0.663 | 0.61 | 0.72038618509 | gnomAD-4.0.0 | 6.84837E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65893E-05 |
A/P | None | None | 0.011 | N | 0.399 | 0.276 | 0.260735089382 | gnomAD-4.0.0 | 6.84825E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00019E-07 | 0 | 0 |
A/S | None | None | 0.811 | N | 0.541 | 0.224 | 0.265010934533 | gnomAD-4.0.0 | 6.84825E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52781E-05 | None | 0 | 0 | 0 | 0 | 0 |
A/T | rs1576520581 | None | 0.103 | N | 0.385 | 0.245 | 0.225215365344 | gnomAD-4.0.0 | 6.84825E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65893E-05 |
A/V | rs115813214 | -0.588 | 0.811 | N | 0.571 | 0.258 | None | gnomAD-2.1.1 | 5.66105E-04 | None | None | None | None | N | None | 5.92132E-03 | 3.97886E-04 | None | 0 | 0 | None | 0 | None | 0 | 7.84E-06 | 0 |
A/V | rs115813214 | -0.588 | 0.811 | N | 0.571 | 0.258 | None | gnomAD-3.1.2 | 1.44356E-03 | None | None | None | None | N | None | 5.01089E-03 | 5.91483E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.44231E-03 |
A/V | rs115813214 | -0.588 | 0.811 | N | 0.571 | 0.258 | None | 1000 genomes | 7.98722E-04 | None | None | None | None | N | None | 3E-03 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
A/V | rs115813214 | -0.588 | 0.811 | N | 0.571 | 0.258 | None | gnomAD-4.0.0 | 2.65504E-04 | None | None | None | None | N | None | 5.08021E-03 | 4.34434E-04 | None | 0 | 0 | None | 0 | 8.27267E-04 | 1.69644E-06 | 1.09917E-05 | 2.24424E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5414 | ambiguous | 0.5576 | ambiguous | -1.324 | Destabilizing | 0.999 | D | 0.618 | neutral | None | None | None | None | N |
A/D | 0.9493 | likely_pathogenic | 0.9646 | pathogenic | -2.306 | Highly Destabilizing | 0.968 | D | 0.663 | neutral | N | 0.52166936 | None | None | N |
A/E | 0.9244 | likely_pathogenic | 0.9392 | pathogenic | -2.258 | Highly Destabilizing | 0.919 | D | 0.636 | neutral | None | None | None | None | N |
A/F | 0.9028 | likely_pathogenic | 0.926 | pathogenic | -1.095 | Destabilizing | 0.988 | D | 0.669 | neutral | None | None | None | None | N |
A/G | 0.2386 | likely_benign | 0.298 | benign | -1.586 | Destabilizing | 0.896 | D | 0.532 | neutral | N | 0.521522314 | None | None | N |
A/H | 0.9716 | likely_pathogenic | 0.977 | pathogenic | -1.825 | Destabilizing | 0.999 | D | 0.654 | neutral | None | None | None | None | N |
A/I | 0.4911 | ambiguous | 0.5303 | ambiguous | -0.42 | Destabilizing | 0.976 | D | 0.684 | prob.neutral | None | None | None | None | N |
A/K | 0.9755 | likely_pathogenic | 0.9805 | pathogenic | -1.599 | Destabilizing | 0.919 | D | 0.653 | neutral | None | None | None | None | N |
A/L | 0.5056 | ambiguous | 0.5194 | ambiguous | -0.42 | Destabilizing | 0.851 | D | 0.599 | neutral | None | None | None | None | N |
A/M | 0.5723 | likely_pathogenic | 0.6279 | pathogenic | -0.425 | Destabilizing | 0.999 | D | 0.65 | neutral | None | None | None | None | N |
A/N | 0.8271 | likely_pathogenic | 0.8527 | pathogenic | -1.534 | Destabilizing | 0.976 | D | 0.656 | neutral | None | None | None | None | N |
A/P | 0.435 | ambiguous | 0.4351 | ambiguous | -0.654 | Destabilizing | 0.011 | N | 0.399 | neutral | N | 0.485317582 | None | None | N |
A/Q | 0.9272 | likely_pathogenic | 0.9348 | pathogenic | -1.609 | Destabilizing | 0.988 | D | 0.687 | prob.neutral | None | None | None | None | N |
A/R | 0.9618 | likely_pathogenic | 0.9647 | pathogenic | -1.31 | Destabilizing | 0.988 | D | 0.672 | neutral | None | None | None | None | N |
A/S | 0.1768 | likely_benign | 0.2083 | benign | -1.867 | Destabilizing | 0.811 | D | 0.541 | neutral | N | 0.491640634 | None | None | N |
A/T | 0.1193 | likely_benign | 0.158 | benign | -1.728 | Destabilizing | 0.103 | N | 0.385 | neutral | N | 0.479140333 | None | None | N |
A/V | 0.1849 | likely_benign | 0.2187 | benign | -0.654 | Destabilizing | 0.811 | D | 0.571 | neutral | N | 0.503152746 | None | None | N |
A/W | 0.9874 | likely_pathogenic | 0.9902 | pathogenic | -1.611 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
A/Y | 0.9596 | likely_pathogenic | 0.9683 | pathogenic | -1.193 | Destabilizing | 0.996 | D | 0.666 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.