Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1566 | 4921;4922;4923 | chr2:178777267;178777266;178777265 | chr2:179641994;179641993;179641992 |
N2AB | 1566 | 4921;4922;4923 | chr2:178777267;178777266;178777265 | chr2:179641994;179641993;179641992 |
N2A | 1566 | 4921;4922;4923 | chr2:178777267;178777266;178777265 | chr2:179641994;179641993;179641992 |
N2B | 1520 | 4783;4784;4785 | chr2:178777267;178777266;178777265 | chr2:179641994;179641993;179641992 |
Novex-1 | 1520 | 4783;4784;4785 | chr2:178777267;178777266;178777265 | chr2:179641994;179641993;179641992 |
Novex-2 | 1520 | 4783;4784;4785 | chr2:178777267;178777266;178777265 | chr2:179641994;179641993;179641992 |
Novex-3 | 1566 | 4921;4922;4923 | chr2:178777267;178777266;178777265 | chr2:179641994;179641993;179641992 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.425 | N | 0.261 | 0.291 | 0.302793454619 | gnomAD-4.0.0 | 1.59081E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85682E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2578 | likely_benign | 0.2026 | benign | -0.385 | Destabilizing | 0.176 | N | 0.257 | neutral | None | None | None | None | N |
N/C | 0.3594 | ambiguous | 0.2673 | benign | 0.307 | Stabilizing | 0.995 | D | 0.33 | neutral | None | None | None | None | N |
N/D | 0.2397 | likely_benign | 0.1892 | benign | 0.02 | Stabilizing | 0.425 | N | 0.261 | neutral | N | 0.50038977 | None | None | N |
N/E | 0.587 | likely_pathogenic | 0.4684 | ambiguous | 0.008 | Stabilizing | 0.495 | N | 0.229 | neutral | None | None | None | None | N |
N/F | 0.5853 | likely_pathogenic | 0.4963 | ambiguous | -0.613 | Destabilizing | 0.981 | D | 0.361 | neutral | None | None | None | None | N |
N/G | 0.3503 | ambiguous | 0.2884 | benign | -0.6 | Destabilizing | 0.329 | N | 0.272 | neutral | None | None | None | None | N |
N/H | 0.1267 | likely_benign | 0.1083 | benign | -0.593 | Destabilizing | 0.975 | D | 0.33 | neutral | N | 0.509452657 | None | None | N |
N/I | 0.2253 | likely_benign | 0.1828 | benign | 0.101 | Stabilizing | 0.642 | D | 0.42 | neutral | N | 0.475339125 | None | None | N |
N/K | 0.4874 | ambiguous | 0.3702 | ambiguous | 0.012 | Stabilizing | 0.425 | N | 0.229 | neutral | N | 0.477865236 | None | None | N |
N/L | 0.2568 | likely_benign | 0.2085 | benign | 0.101 | Stabilizing | 0.495 | N | 0.353 | neutral | None | None | None | None | N |
N/M | 0.3495 | ambiguous | 0.2894 | benign | 0.436 | Stabilizing | 0.981 | D | 0.329 | neutral | None | None | None | None | N |
N/P | 0.6829 | likely_pathogenic | 0.569 | pathogenic | -0.033 | Destabilizing | 0.828 | D | 0.396 | neutral | None | None | None | None | N |
N/Q | 0.4284 | ambiguous | 0.3333 | benign | -0.458 | Destabilizing | 0.828 | D | 0.287 | neutral | None | None | None | None | N |
N/R | 0.5121 | ambiguous | 0.3936 | ambiguous | 0.049 | Stabilizing | 0.704 | D | 0.214 | neutral | None | None | None | None | N |
N/S | 0.0828 | likely_benign | 0.0773 | benign | -0.262 | Destabilizing | 0.003 | N | 0.107 | neutral | N | 0.387577125 | None | None | N |
N/T | 0.1187 | likely_benign | 0.1005 | benign | -0.119 | Destabilizing | 0.003 | N | 0.101 | neutral | N | 0.350094916 | None | None | N |
N/V | 0.233 | likely_benign | 0.1874 | benign | -0.033 | Destabilizing | 0.704 | D | 0.381 | neutral | None | None | None | None | N |
N/W | 0.8561 | likely_pathogenic | 0.7826 | pathogenic | -0.547 | Destabilizing | 0.995 | D | 0.357 | neutral | None | None | None | None | N |
N/Y | 0.2469 | likely_benign | 0.2016 | benign | -0.301 | Destabilizing | 0.975 | D | 0.337 | neutral | N | 0.475835001 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.