Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15682 | 47269;47270;47271 | chr2:178618414;178618413;178618412 | chr2:179483141;179483140;179483139 |
N2AB | 14041 | 42346;42347;42348 | chr2:178618414;178618413;178618412 | chr2:179483141;179483140;179483139 |
N2A | 13114 | 39565;39566;39567 | chr2:178618414;178618413;178618412 | chr2:179483141;179483140;179483139 |
N2B | 6617 | 20074;20075;20076 | chr2:178618414;178618413;178618412 | chr2:179483141;179483140;179483139 |
Novex-1 | 6742 | 20449;20450;20451 | chr2:178618414;178618413;178618412 | chr2:179483141;179483140;179483139 |
Novex-2 | 6809 | 20650;20651;20652 | chr2:178618414;178618413;178618412 | chr2:179483141;179483140;179483139 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | 0.801 | N | 0.327 | 0.15 | 0.504418060211 | gnomAD-4.0.0 | 1.59392E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.03122E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.0735 | likely_benign | 0.0841 | benign | -0.429 | Destabilizing | 0.688 | D | 0.316 | neutral | None | None | None | None | I |
L/C | 0.3756 | ambiguous | 0.4812 | ambiguous | -0.739 | Destabilizing | 0.998 | D | 0.311 | neutral | None | None | None | None | I |
L/D | 0.1711 | likely_benign | 0.2084 | benign | -0.215 | Destabilizing | 0.525 | D | 0.329 | neutral | None | None | None | None | I |
L/E | 0.0741 | likely_benign | 0.0922 | benign | -0.309 | Destabilizing | 0.002 | N | 0.224 | neutral | None | None | None | None | I |
L/F | 0.1172 | likely_benign | 0.1455 | benign | -0.571 | Destabilizing | 0.989 | D | 0.321 | neutral | N | 0.504463995 | None | None | I |
L/G | 0.217 | likely_benign | 0.2624 | benign | -0.538 | Destabilizing | 0.842 | D | 0.355 | neutral | None | None | None | None | I |
L/H | 0.1461 | likely_benign | 0.187 | benign | 0.107 | Stabilizing | 0.974 | D | 0.315 | neutral | None | None | None | None | I |
L/I | 0.073 | likely_benign | 0.0737 | benign | -0.264 | Destabilizing | 0.891 | D | 0.326 | neutral | N | 0.461425458 | None | None | I |
L/K | 0.1139 | likely_benign | 0.1286 | benign | -0.311 | Destabilizing | 0.525 | D | 0.309 | neutral | None | None | None | None | I |
L/M | 0.0872 | likely_benign | 0.0962 | benign | -0.539 | Destabilizing | 0.991 | D | 0.328 | neutral | None | None | None | None | I |
L/N | 0.1318 | likely_benign | 0.148 | benign | -0.161 | Destabilizing | 0.842 | D | 0.348 | neutral | None | None | None | None | I |
L/P | 0.1489 | likely_benign | 0.1407 | benign | -0.29 | Destabilizing | 0.974 | D | 0.34 | neutral | None | None | None | None | I |
L/Q | 0.0678 | likely_benign | 0.0818 | benign | -0.351 | Destabilizing | 0.728 | D | 0.347 | neutral | None | None | None | None | I |
L/R | 0.1306 | likely_benign | 0.161 | benign | 0.166 | Stabilizing | 0.842 | D | 0.352 | neutral | None | None | None | None | I |
L/S | 0.089 | likely_benign | 0.0989 | benign | -0.546 | Destabilizing | 0.801 | D | 0.327 | neutral | N | 0.440171769 | None | None | I |
L/T | 0.0869 | likely_benign | 0.089 | benign | -0.539 | Destabilizing | 0.842 | D | 0.333 | neutral | None | None | None | None | I |
L/V | 0.06 | likely_benign | 0.0636 | benign | -0.29 | Destabilizing | 0.771 | D | 0.343 | neutral | N | 0.457055662 | None | None | I |
L/W | 0.2504 | likely_benign | 0.2886 | benign | -0.593 | Destabilizing | 0.998 | D | 0.354 | neutral | None | None | None | None | I |
L/Y | 0.2369 | likely_benign | 0.2878 | benign | -0.351 | Destabilizing | 0.991 | D | 0.303 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.