Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15715 | 47368;47369;47370 | chr2:178618315;178618314;178618313 | chr2:179483042;179483041;179483040 |
N2AB | 14074 | 42445;42446;42447 | chr2:178618315;178618314;178618313 | chr2:179483042;179483041;179483040 |
N2A | 13147 | 39664;39665;39666 | chr2:178618315;178618314;178618313 | chr2:179483042;179483041;179483040 |
N2B | 6650 | 20173;20174;20175 | chr2:178618315;178618314;178618313 | chr2:179483042;179483041;179483040 |
Novex-1 | 6775 | 20548;20549;20550 | chr2:178618315;178618314;178618313 | chr2:179483042;179483041;179483040 |
Novex-2 | 6842 | 20749;20750;20751 | chr2:178618315;178618314;178618313 | chr2:179483042;179483041;179483040 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs553017488 | -0.459 | 0.004 | D | 0.308 | 0.103 | 0.304108284078 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
E/D | rs553017488 | -0.459 | 0.004 | D | 0.308 | 0.103 | 0.304108284078 | gnomAD-4.0.0 | 1.77998E-05 | None | None | None | None | N | None | 2.99312E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.24969E-05 | 0 | 0 |
E/K | rs764958886 | 0.451 | 0.581 | N | 0.597 | 0.301 | 0.307648195649 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.68E-05 | 0 |
E/K | rs764958886 | 0.451 | 0.581 | N | 0.597 | 0.301 | 0.307648195649 | gnomAD-3.1.2 | 6.59E-06 | None | None | None | None | N | None | 0 | 6.57E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs764958886 | 0.451 | 0.581 | N | 0.597 | 0.301 | 0.307648195649 | gnomAD-4.0.0 | 2.48057E-06 | None | None | None | None | N | None | 0 | 1.6699E-05 | None | 0 | 0 | None | 0 | 3.29381E-04 | 8.48077E-07 | 0 | 0 |
E/Q | rs764958886 | -0.167 | 0.83 | N | 0.706 | 0.209 | 0.330331372229 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
E/Q | rs764958886 | -0.167 | 0.83 | N | 0.706 | 0.209 | 0.330331372229 | gnomAD-4.0.0 | 2.0538E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69963E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2601 | likely_benign | 0.2222 | benign | -0.755 | Destabilizing | 0.581 | D | 0.665 | neutral | N | 0.467463933 | None | None | N |
E/C | 0.8594 | likely_pathogenic | 0.802 | pathogenic | -0.304 | Destabilizing | 0.993 | D | 0.774 | deleterious | None | None | None | None | N |
E/D | 0.2806 | likely_benign | 0.2623 | benign | -0.644 | Destabilizing | 0.004 | N | 0.308 | neutral | D | 0.534808793 | None | None | N |
E/F | 0.8368 | likely_pathogenic | 0.7687 | pathogenic | -0.187 | Destabilizing | 0.993 | D | 0.778 | deleterious | None | None | None | None | N |
E/G | 0.351 | ambiguous | 0.3078 | benign | -1.055 | Destabilizing | 0.83 | D | 0.711 | prob.delet. | N | 0.512041043 | None | None | N |
E/H | 0.5588 | ambiguous | 0.4683 | ambiguous | -0.08 | Destabilizing | 0.98 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/I | 0.5453 | ambiguous | 0.4491 | ambiguous | 0.041 | Stabilizing | 0.929 | D | 0.785 | deleterious | None | None | None | None | N |
E/K | 0.3032 | likely_benign | 0.231 | benign | 0.043 | Stabilizing | 0.581 | D | 0.597 | neutral | N | 0.477105049 | None | None | N |
E/L | 0.6331 | likely_pathogenic | 0.5423 | ambiguous | 0.041 | Stabilizing | 0.929 | D | 0.775 | deleterious | None | None | None | None | N |
E/M | 0.6226 | likely_pathogenic | 0.5437 | ambiguous | 0.266 | Stabilizing | 0.993 | D | 0.785 | deleterious | None | None | None | None | N |
E/N | 0.4117 | ambiguous | 0.3576 | ambiguous | -0.582 | Destabilizing | 0.764 | D | 0.747 | deleterious | None | None | None | None | N |
E/P | 0.9621 | likely_pathogenic | 0.9517 | pathogenic | -0.204 | Destabilizing | 0.929 | D | 0.799 | deleterious | None | None | None | None | N |
E/Q | 0.1818 | likely_benign | 0.1529 | benign | -0.475 | Destabilizing | 0.83 | D | 0.706 | prob.neutral | N | 0.478093858 | None | None | N |
E/R | 0.3874 | ambiguous | 0.2936 | benign | 0.372 | Stabilizing | 0.866 | D | 0.751 | deleterious | None | None | None | None | N |
E/S | 0.257 | likely_benign | 0.2241 | benign | -0.78 | Destabilizing | 0.48 | N | 0.639 | neutral | None | None | None | None | N |
E/T | 0.2785 | likely_benign | 0.2335 | benign | -0.517 | Destabilizing | 0.866 | D | 0.767 | deleterious | None | None | None | None | N |
E/V | 0.3547 | ambiguous | 0.2926 | benign | -0.204 | Destabilizing | 0.908 | D | 0.772 | deleterious | D | 0.541729781 | None | None | N |
E/W | 0.9483 | likely_pathogenic | 0.9222 | pathogenic | 0.147 | Stabilizing | 0.993 | D | 0.782 | deleterious | None | None | None | None | N |
E/Y | 0.7585 | likely_pathogenic | 0.6672 | pathogenic | 0.108 | Stabilizing | 0.993 | D | 0.789 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.